| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2090 |
|---|
| Symbol | |
|---|
| ID | 5670491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2515804 |
|---|
| End bp | 2516259 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641241012 |
|---|
| Product | NifU family SUF system FeS assembly protein |
|---|
| Protein accession | YP_001506433 |
|---|
| Protein GI | 158313925 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR01994] SUF system FeS assembly protein, NifU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTCG ACTCCATGTA CCAGGAGATC ATCCTGGACC ACTACCGCAA CCCGCACCAC
CGCGGCCTGC GCGACCCGTT CGATGCCGAG GTGCACCACG TCAACCCGAC CTGCGGCGAC
GAGGTGACCC TGCGGGTCAA GGTCGCCGAC GGTGTCGTCT CGGACGTGTC CTACGAGAGC
GAGGGCTGCT CGATCAGCCA GGCGTCGGCC AGCGTGATGG CCGACCTGGT GATCGGGAAG
TCGGTGGCGG ACGCGCTCGA GCTCGAACGC GAGTTCCTGG CGCTGATGCA GTCCCGCGGC
ACCCAGGAGG GCGACGAGGA GGTGCTCGAG GACGCGGTCG CGTTCGCGGG CGTCTCCAAG
TACCCGGCCC GGGTGAAGTG CGCACTGCTG TCCTGGATGG CCTGGAAGGA CGCCACCGCG
CAGGCCACCG CCGTCGTCCC GGAGCAGGAG AAGTGA
|
|---|
| Protein sequence | MKLDSMYQEI ILDHYRNPHH RGLRDPFDAE VHHVNPTCGD EVTLRVKVAD GVVSDVSYES
EGCSISQASA SVMADLVIGK SVADALELER EFLALMQSRG TQEGDEEVLE DAVAFAGVSK
YPARVKCALL SWMAWKDATA QATAVVPEQE K
|
|---|
| |