Gene Franean1_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2069 
Symbol 
ID5670470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2492725 
End bp2494230 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content76% 
IMG OID641240991 
Productserine/threonine protein kinase 
Protein accessionYP_001506412 
Protein GI158313904 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.832371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.49505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG ACGGCGGTTC GTTCGGCCCG GGCCCGGCAG AGATGATCGG CTCCACCGGA 
TCGATCGTCG CCGGCCGGGT CGTCGCCGGC CGCTACCGGC TGATCGAATG CGTCGGCGCC
GGCTCGATGG GCACGGTGTG GCGCGCCCTC GACGTGCTGC TGCGGGCCGA GGTGGCCGTG
AAGGCCATCT GGATCGGCGG CCGCGCGGGT GCGCCAGGCC CGGACGGCGC CGACCCGCAA
CGGCTGGCCG CGGCCGTGCG CGAGGCCCGC AACGCCGCCC AGCTGCGGGC GAACCCGCAC
GTGGTCTCGG TGACCGACGT CATCCAGGAC GGCGGCCTGC CGTGGATCGT CATGGAGCTG
GTCGCCGCCA CGTCGCTGGA CACAGCGGTC CGCCGCGGCG GACCGCTGCC GCCGCGCCGG
GTGGCCGAGA TCGGGCTCGC CGTCCTGGAC GCGCTGACCG CCGGTCAGCG GGTCGGCCTC
CTGCACCGTG ACGTGAAGCC GTCGAACATC CTGCTCGCCG ACGACGGGCG GGTGCTGCTC
ACCGACTTCG GCATCGCCAC CAACGTCGCG GACACGACCG ACGCGGGCGC GGGCGGCAGT
GCGGGAACCC CCGCCTACCT CGCGCCGGAA CGGATCACCC GGGGCCCGGC CTCGCTCGCG
GCCGACCTGT TCTCCCTCGG AGCCACCCTC TACTTCGCCG CCGGCGGCAT CCCGCCGTTC
GCCCGCGAGA CGGTGCCGCT CACCCTCGGC GCGGTCCTGC ACGTCGATCC ACCCGCGCTG
ACGGACACCG ACGCGCTGTG GCCGGCGATC GGCGGCCTGC TGGTCAAGAA CCCACAGGCG
AGGCTGAGCG CGGAGGGCGC GGAGGTCCTG CTCACCCGCG TGCTGCGGCT GGTCCCCGGC
GAGCCGGACA AGGCTGCCAC GCGACTACCA ACCCAACCGC CCGCCGCCCC ACCGCCCGCG
TCCATGCCAG TGCGGCCAGT GCGGCCAGTA CGGCCAGTAC GGCCAGTGCC TGCGCCGTGG
CCGATGCCTC TCCCGGACGG CCCGCGCCGG CGCCGTCCAC TGGTCGCGCT CGCCGCCGGC
GTGGGGCTCG TGCTCGTCCT GGTCGCCGCC GGGCTGCTCT GGGCCGCGCG GGACGAGCGC
CCACCGCCCA CGGCCGGCCC ACCGCCCGCC GCCGACCTGC TGCCCGCCGG CATGGCCGGC
ACGTGGGTCG GATCGGTGAC CCAGGGGCCG ATCGAGTTCG GCGTCGAGAT CGTGCTCAGG
CGCGGCGGCA TCGGCGAGAT CGTCGGCGAC AGCGACTATC CGACGGACGG CTGCGCCGCG
CGGCTGCGCC TCCTGGAGGC CGGCGCTGAC CGCGTCACCG TCCAGGAACG GCTGTTCCGC
TCGGGCGCGC TGTGTCGCGG CGCCGAACGG CTCGTGCTGG CGTTGCGCCC CGACGGCCGG
CTGGCCTACA CCTTCCCCGC GACGAATATC AACTCAACGG GTACCGGCGT TCTCACCCGG
CGCTGA
 
Protein sequence
MPRDGGSFGP GPAEMIGSTG SIVAGRVVAG RYRLIECVGA GSMGTVWRAL DVLLRAEVAV 
KAIWIGGRAG APGPDGADPQ RLAAAVREAR NAAQLRANPH VVSVTDVIQD GGLPWIVMEL
VAATSLDTAV RRGGPLPPRR VAEIGLAVLD ALTAGQRVGL LHRDVKPSNI LLADDGRVLL
TDFGIATNVA DTTDAGAGGS AGTPAYLAPE RITRGPASLA ADLFSLGATL YFAAGGIPPF
ARETVPLTLG AVLHVDPPAL TDTDALWPAI GGLLVKNPQA RLSAEGAEVL LTRVLRLVPG
EPDKAATRLP TQPPAAPPPA SMPVRPVRPV RPVRPVPAPW PMPLPDGPRR RRPLVALAAG
VGLVLVLVAA GLLWAARDER PPPTAGPPPA ADLLPAGMAG TWVGSVTQGP IEFGVEIVLR
RGGIGEIVGD SDYPTDGCAA RLRLLEAGAD RVTVQERLFR SGALCRGAER LVLALRPDGR
LAYTFPATNI NSTGTGVLTR R