Gene Franean1_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2060 
Symbol 
ID5670461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2483469 
End bp2484338 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content72% 
IMG OID641240982 
Producthypothetical protein 
Protein accessionYP_001506403 
Protein GI158313895 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0384538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCGG CGACGCTCGA CCTTGCGATC ATCACGGGGC TGTCCGGTGC CGGCCGCAGC 
ACGGCGGCTA AGTGCCTCGA GGACCTCGGC TGGTTTGTCG TCGACAACCT GCCCCCGGCG
CTGCTGTCGA CGATGGCCGA GCTGGGGCAC CGTTCCGGCG GGGCGGTGAG CCGGATCGCC
GTCGTCGTCG ACGTGCGCGG GCGGGCGTTC TTCTCCGACC TGCGCGCGGC GGTGGAGGCA
CTGGACTCGC GCGGCATGCA CCCGCGGATG CTCTTCCTGG AAGCGTCCGA CGATGCGCTG
GTGCGCCGCT TCGACCATGT CCGCCGTCCG CACCCGCTGC AGGGCGACGA GCGGGTCGTG
GACGGCATCA ACCGGGAGCG GACGCTGCTC GCGGAGCTGC GCGGCGAGGC CGACCTCGTC
CTCGACACGA CCGACCTCAA CGTGCACGAG CTGAGGGCCA AGATCGACGC CGCCTTCGGC
CAGCCGCGCG CCAACCGGCT CAACGCCACC GTGATCTCGT TCGGCTACAA GTACGGCCTG
CCGCTGGACG CCGACCTCGT CGCCGACTGC AGGTTCCTGC CCAACCCGCA CTGGGTCGAG
GCGTTGCGCC CCTACACCGG GCGGGACTCG CAGGTCCGCG ATTACGTGCT GGCGCAGCCC
GGCGCGACGG AGTTCGTCGA CCAGTACACG GCGTTGCTCA GGCTGGTCGG CGAGGGGTAC
GTGCGGGAGG GCAAGCGGTA CCTGACCCTG GCGGTGGGCT GTACCGGGGG CAAGCACCGC
AGCGTCGCCG TCGCCGAGCA GCTCGGGGCC CGGCTCGCCG CCGACGGCGT CGGCGTCCGG
GTCGTGCACC GGGATCTGGG CCGCGAGTGA
 
Protein sequence
MTAATLDLAI ITGLSGAGRS TAAKCLEDLG WFVVDNLPPA LLSTMAELGH RSGGAVSRIA 
VVVDVRGRAF FSDLRAAVEA LDSRGMHPRM LFLEASDDAL VRRFDHVRRP HPLQGDERVV
DGINRERTLL AELRGEADLV LDTTDLNVHE LRAKIDAAFG QPRANRLNAT VISFGYKYGL
PLDADLVADC RFLPNPHWVE ALRPYTGRDS QVRDYVLAQP GATEFVDQYT ALLRLVGEGY
VREGKRYLTL AVGCTGGKHR SVAVAEQLGA RLAADGVGVR VVHRDLGRE