| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2044 |
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| Symbol | |
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| ID | 5670445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2458801 |
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| End bp | 2462361 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240966 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_001506387 |
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| Protein GI | 158313879 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.864126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCAGCG GTCCCGTAGT CGTCGACCGC CGCCGCCTGC TAGTGGTCCT CACCGTCGGG
ATGGTGGGGT TCTTCCTGTT GGTCCTGACC GTCCCCGGAT CCCCGGGGCG GCTGCGTGTC
GGGACGTGGA TCGCACTGGC CATCGCGCTG GTCAACCTGG CCCTCATCCA GCGGCTCGTC
ACCGCCCACG AGCGGTGGCC GTGGCTGGCC GCGCTCGCCG CCGTCTCGAT GGCGGCCGGG
ATGGGAGCCG CGGCCGCGGA CGCCATACCC GGGGAGGAAA GCCAGCTGTT CCTGCTGTGG
TTCCCCTGGA TCGCCAGCTA CTGCGGTGTG CTCAGGCTCG GCTGGAGCCT GGCCATGGCG
GCCTGGGTGA CCCTGACGCT GTTGCTGGCG GCGTCGGTCA ACTCCGCTCT CGCCGGCTCG
CCGGCGCTGC TGATCGCGGC GGCCGTCAGC TCGGCCGGCG GCTGCCTGGT GATGTACGTG
CTGTTCCAGT GGCGCGGGGA GCAGGCCTAC TCCGATCCGC TGACGTCCCT GGTGGCACGC
AGCGGGCTGA CTCGCGCCGC GGACCCGGCG ATCGCACGGG CGGTCAAGAA GGACCGCGAG
GCGGTCCTGC TCCTGCTCGA CATCAACCGG TTCCGGGAGG TCAACGACGC GCTGGGGCAC
GAGGCCGGTG ACGAGCTGCT GCGCCAGCTG GCCCGCGCTC TTCCCACGGT GACGCCGCGG
CCGTCCTTCG TCGGCCGGCT CGGCAGCGAC GAGTTCGCGC TCGTCATCCC CGGCCCGCCC
GGCGCGGACC GGCGTGACGA CGAGCTGGGC GGTGGTGATG CCAGCCGCGG AGATCCGGAC
CGCGGCGGGT CCGCACACGG CGGCCCGCAC CGGGGCGGGT CCGTGTCGAC GTCGGCGAGT
CGGGAGAGCG ACCTGCGCGA GCTTGGCCAG TCGGTGCTGC GCCAGATCGA GGGGCCGTTC
ACCGTGCACG GCGTCGAGGT CGAGGTCGAG GCGAGCGCCG GGCTGGCGGT CGCCCCGCGT
GACGGGGAGA CGATCGGGTC GTTGCTGCCC TGCGCGGACG CGGCGCTGTC CCGGGCTAAG
CGCGAGGGCG AGCGGGTCGG GCTGTGGGAC GCGGGCATCG CGGGCGTGCG CTCCTGGGAG
ATCGCGCTGT ACGCGGAGCT GCGCGCGGCT ATCGCCAGGG ACGAGCTCAT CGTCTTCTAC
CAGCCGCTCC AGGCGGCGGC GACCGGGCGG ATCGTCGGCG TCGAGGCTCT CGTGCGCTGG
AGCCATCCGA CCCGCGGGCT GTTGCCGCCC GGCGCGTTCC TGCCGATGGC GGAGCGCTCG
GCGCTCATCG TCGACGTCAC GAGGTGGGTG CTGGACGAGG CGCTGCGGCA GTGCGCCGCG
TGGGCCGCCC GTGGGCTGCA CGTGCCCGTC TCGGTGAACC TCTCCGCCCG CATGCTCGTC
CTGGACGACC TGCCCAGTCT GGTGACCGGG AGCCTTGCCC GCCACCAGCT CCCCCCGGAC
GTACTGACCC TTGAGATCAC CGAGAGCGCC CTGGTGACCC AGCCCGGCCG GGCCGCCGCC
ATGCTCCGGG AGCTGCGCAG CAAGGGCGTC AAGCTCGCCC TGGACGACTT CGGCACCGGT
TACAGCTCGA TGGAGATCCT CAAGGCGCTG CCGTTCGACG AGGTCAAGAT CGACCGCGGG
TTCGTCGCGG ACGTCCGCGG CAGCCTGCTG GACGCGGCGA TCGTGCGTTC GGTGCTGGAC
CTCGGCCACC GGCTCGGCCT GCGGGTCGTC GGCGAGGGCG TCGAGGACGA CCGGACGCTG
CGGATGATGA CCGAGCTCGG CTGCGACATC CTGCAGGGCG ACGCGGTCTC GCGCCCGCGC
CCGCCGTCGC ATCTCGAGGA CCTGCTGGTG GAGCGGGCCG CACCCGCCGA CCGCCCCGGC
GCCGCCGGTG CGGCGGTCCC TGCCGCCCTG CCGGCTGATG GCGCTGTGCC GGCTGGTGGT
GCTGTGCCGG CCGGCAGCGG CGCGCCGGTG GGCGGTGCCG GGCCGGCGGC CGACGCGGTG
GACGCGGCGC GTTCCGAGCC GATCGTCGGC CCGGAGGCCC CCTTCACGGT GTCGCAGACG
CGGCGGTTCG GTGTCCTGGC CCCGCCGGTG GCGGACGAGG CGGCGCGGGT CGCCGCGACC
CGGCGCTACG AGATCGCGTT CCGGCCGCGG ACCTACCCCC TGGACGACAT GGCGGCCCTC
GCGGCCGCGA TGACCGGCTG CAACGTGGGG TCGGTGCTCC TGGTCGGCGC CGACTCGGAG
ACCTACCTGG GCCGCCACGG CCACGACCTG AACGACGTGC CGGCCCGGGT CGGCGTGGCC
TCGCACGCCG TGGCGGCGGG CGAGCTGCTG GAGATTCCCG ACGCGATGCT CGACACCCGG
TTCGCGCACG GGACCAGGGC GTTCCCCGGC CGGCAGATCC GTTTCATCGC AGCCGTCCCG
GTGCGGACCT CCGACGGCCA CGCCATCGGC GCGGTTACGA TCAGCGACCG GATCCCGCGG
CGGCTCACCC CGGGCCAGCG CGAGGCGCTG GAGAGCCTCG CCCAGCACGC CGCGGTCATG
ATGGACGTCC GCCGGGAGGC CGTGCTGCTC GCCGTGGTCA CCGACACCGC CCGGGCACTG
GACCAGCTCT GTTACCCGGA TGATCTCCCG GCGGCCGCGT CCCTGGTCAG TGACGCCGCG
CGGCACATGC TGGGCGGCGA CGTCGTCACC GTCCTGATGT CCGACACGCC CGGCTCGACG
GTCTACAGCT CCGTAGGGGC TTCCCTCGCG CCCGGGGCCA CCTCCCTCAT CAAGCCGGGG
CAGCGGTTCA ACTCGAACGA CGAGACGGTC ATCGGTGAGG TCCTGCGGAC ACAGAGCCCG
CTGTTCGTCC CGGACGCGCC GACCTTCCCC GGCTTCAACC TGGACATCGT CCGTGCCAGC
GGCGTGGCTT CTGCGTTCCT CGTCCCGATC CCGGGGGAGG GCGGTGCGCT CGGCGTCATG
TGCGCCCGCT GGCCGGCCCC GGTGGCCGCG ATCGACCCGT CGTTGTACCG CGCGATGGCG
CTGCTGGTCG GGCAGGTGGG GCACGGCCTC GGCCGGCTGC GGGCCGCCTC GGATCGGGAG
CACCACCCGG ACGGTACGGC CGGGCTGACC GGCCGGGCGG CCTTCCTCTC CACCTTGCAG
GGGCTGTCGC CGGGCGCCGG CGTGTGCCTG TTCGACGTCC AGGCGGGCCG GGACAGGTTG
ACCAGGCGGT TCGCCGAGCT CCTGCGGGCC GTCTGCGACG AGTCCGCGTA TCTCGCCCGC
TGGTCGGACA GCCGGTTCGC GGTGGCCGTC CCGACCGGCG GGCGGGAACG GGCCGAGGCG
ATGGTCGACG AGGTCCGCCG CTCGTGGGCC CGGGAGTCGG CGGTGCCGAT CGCCGTCGGC
ATCTCGGTGA CCAGGAGCCA CGAGCCGTCG AGCGCCGCGC TCATCGACGC GGAGAACCGC
CTGCTGGAGA CGATGGCGGT GGTGATCCGG GCCGAGCGGG CAGCCGCGGC GCGCGTGACA
GCAACGTCAG CAGGGGTCTG A
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| Protein sequence | MTSGPVVVDR RRLLVVLTVG MVGFFLLVLT VPGSPGRLRV GTWIALAIAL VNLALIQRLV
TAHERWPWLA ALAAVSMAAG MGAAAADAIP GEESQLFLLW FPWIASYCGV LRLGWSLAMA
AWVTLTLLLA ASVNSALAGS PALLIAAAVS SAGGCLVMYV LFQWRGEQAY SDPLTSLVAR
SGLTRAADPA IARAVKKDRE AVLLLLDINR FREVNDALGH EAGDELLRQL ARALPTVTPR
PSFVGRLGSD EFALVIPGPP GADRRDDELG GGDASRGDPD RGGSAHGGPH RGGSVSTSAS
RESDLRELGQ SVLRQIEGPF TVHGVEVEVE ASAGLAVAPR DGETIGSLLP CADAALSRAK
REGERVGLWD AGIAGVRSWE IALYAELRAA IARDELIVFY QPLQAAATGR IVGVEALVRW
SHPTRGLLPP GAFLPMAERS ALIVDVTRWV LDEALRQCAA WAARGLHVPV SVNLSARMLV
LDDLPSLVTG SLARHQLPPD VLTLEITESA LVTQPGRAAA MLRELRSKGV KLALDDFGTG
YSSMEILKAL PFDEVKIDRG FVADVRGSLL DAAIVRSVLD LGHRLGLRVV GEGVEDDRTL
RMMTELGCDI LQGDAVSRPR PPSHLEDLLV ERAAPADRPG AAGAAVPAAL PADGAVPAGG
AVPAGSGAPV GGAGPAADAV DAARSEPIVG PEAPFTVSQT RRFGVLAPPV ADEAARVAAT
RRYEIAFRPR TYPLDDMAAL AAAMTGCNVG SVLLVGADSE TYLGRHGHDL NDVPARVGVA
SHAVAAGELL EIPDAMLDTR FAHGTRAFPG RQIRFIAAVP VRTSDGHAIG AVTISDRIPR
RLTPGQREAL ESLAQHAAVM MDVRREAVLL AVVTDTARAL DQLCYPDDLP AAASLVSDAA
RHMLGGDVVT VLMSDTPGST VYSSVGASLA PGATSLIKPG QRFNSNDETV IGEVLRTQSP
LFVPDAPTFP GFNLDIVRAS GVASAFLVPI PGEGGALGVM CARWPAPVAA IDPSLYRAMA
LLVGQVGHGL GRLRAASDRE HHPDGTAGLT GRAAFLSTLQ GLSPGAGVCL FDVQAGRDRL
TRRFAELLRA VCDESAYLAR WSDSRFAVAV PTGGRERAEA MVDEVRRSWA RESAVPIAVG
ISVTRSHEPS SAALIDAENR LLETMAVVIR AERAAAARVT ATSAGV
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