| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2037 |
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| Symbol | |
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| ID | 5670438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2449126 |
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| End bp | 2450337 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240959 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001506380 |
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| Protein GI | 158313872 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.80961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCA GCCCACGCAC CCCTCGACCC AGGACCAGAC GGGCCGGGGT CCTGCGGCCG
GTCGCCGGGG TGGTCGCGGG CCTGGCGATG GTCGGCGCGG CGTTGACCGC CTGCGGCGGT
GGTGACTCGA ACGAGGCCGG TACCAAGGAG TTCCTCATCG GCTTCCAGGG ACCGCTGTCC
GGGGAGAACC AGCAGCTCGG CATCAACGCC TACAACGGCG TGCTGACCGC CGTCGACCTG
GCCAACCGCA CCGGCGGCCT GCCGTTCACC CTGCGGATCG TCGCCTCCGA CGACCAGGGC
GTGCCCGAGC AGGGGCCGAC CGCCGCCCAG AAGCTCATCG ACAACCCGGA CGTCGTCGCG
GTCGTCGGCC CGGTGTTCTC CGCGCCGACG AAGGCCAGCG AGCCGCTGTA CAGCCAGACA
GGCCTGCTGT CGGTCAGCCC GTCGGCGACC GCCCCGGCGC TCACCGACCT CGGGTTCACC
AGCTTCTACC GGGTGATCGC ACCGGACACC GTGCAGGGCG CCGGCGCCGC CGAGTACCTC
GCCAAGGTCG TGAAGGCCAA GCGCGTCTAC TCGCTGGACG ACCGCAGCGA GTACGGCACC
GGCCTCTCCG GCGCCGTCGA GCGCGGCCTG AAGCAGGCGG GCGTCGCCTA CACCCACGAC
GGGATCAACC CGACGAAGGA CTACACCTCC CAGGCGACGA AGATCATGGC GGACGGCGCC
GACGCCGTCT ACTACTCCGG GTACTACTCC GACTTCGCGC TCCTCACGAA GGCGCTGCGC
AGCAAGGGGT ACGACGGGGC GATCCTCAGC GGCGACGGCT CGAACGACGA CCAGTACATC
CGCCAGGCCG GCGCGGCGAA CGCCGAGGGC ACGCTCATCA CCTGCCCCTG CTCGGACGCC
AACACCGACC CGGCCGCCAC CGGCTTCGTC AGCGAGTACA AGAAGGTCAA CAGCGGCCTG
AAGCCGGGCA CGTACTCCGG CGAGGCCTAC GACGCCACCA ACGCCATCAT CTCGGTGCTG
CGCAAGCTCG GGACCGGCGC CAGCCGCGAG TCGGTGCTCG CCGACTTCGG CTCGGTCGAC
TTCCCCGGGG TGACCAAGCG GATCCGCTTC GAGCGCAACG GTGACGTCCA GGGCTCGACC
GTCTACGTGT ACCAGGTGAA GGACGGCCAG CGCGTGGTGC TCGGGCCGGT CAGCTCGCTC
GTCAAGCCGT GA
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| Protein sequence | MTGSPRTPRP RTRRAGVLRP VAGVVAGLAM VGAALTACGG GDSNEAGTKE FLIGFQGPLS
GENQQLGINA YNGVLTAVDL ANRTGGLPFT LRIVASDDQG VPEQGPTAAQ KLIDNPDVVA
VVGPVFSAPT KASEPLYSQT GLLSVSPSAT APALTDLGFT SFYRVIAPDT VQGAGAAEYL
AKVVKAKRVY SLDDRSEYGT GLSGAVERGL KQAGVAYTHD GINPTKDYTS QATKIMADGA
DAVYYSGYYS DFALLTKALR SKGYDGAILS GDGSNDDQYI RQAGAANAEG TLITCPCSDA
NTDPAATGFV SEYKKVNSGL KPGTYSGEAY DATNAIISVL RKLGTGASRE SVLADFGSVD
FPGVTKRIRF ERNGDVQGST VYVYQVKDGQ RVVLGPVSSL VKP
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