| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2032 |
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| Symbol | |
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| ID | 5670433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2441642 |
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| End bp | 2442952 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240953 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001506375 |
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| Protein GI | 158313867 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0304773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.779517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCCG GCGCCCGGGA CGCGGGCTGG AGCCTGGCCG ACGTGCCGGA CCAGCGGGGA
CGGACCGCCG TCGTCACCGG TGCGAACAGC GGCATCGGCT TCGAGGCGGC GAAGGCGCTC
GCCGAGCGCG GCGCGACCGT CGTCCTGGCC TGCCGCGAGC CGGCCCGGGC CGAGCAGGCC
GCCGCACGCA TCCGGGCCGC CGCGCCGCGG GCGGACGTCC ACGTCGAGCC GCTCGACCTG
ATCTCGATGA CCTCCGTGCG CGCGGCCGCC GAACGGATCC GGGCCGCCCA CCCGCGGCTC
GACCTGCTCG TCAACAACGC CGGGGTGATG CTGCCGTCGC CCGGTCCCGG CGGTGCCGCC
CTCGGTGCCG GCTTTGGTGA CGACGGCCTC GGTGATCACG GCATCGAGCC GACGTTCGGG
GTCAACCACC TGGGGCACTT CGCGCTGACG GGCCTCCTGC TCGACCGCCT TCTGGCGACG
CCGCACTCGC GGATCGTGAC GGTCAGCAGC CTCGCCCACC TCGTCGGCCG CCTCGACCTC
GAGCAGCTGC GCCGCCTCCC GCCGCACGCC GACCGACCGG GGGGCAGCCC GCCCGTGGTC
GTGCCCGACC AGCGTGCCGG GTCGCCGTCC GAACCACCCC TGGCGTCGCC GGCCCGCCAG
CGTTCACAGC GGAGGTCAGA AACACAGCGG AGGTCAGAAA CACAGCGGAG GTCAGAAACA
CAGCGGGGGT CAGGAACACC GCGCGCGCAG GGCATGCAGC GCCTCCAGAG TCTTCAGGGC
ACGCGGGGCC CGCAGAGCCG GCGGCTGCCC CGGCAGCGCC TGCCGTATCC GACATCCAAG
CTGGCGAACC TGATGTTCAC CTTCGAGCTG CAGCGCCGGC TCGCGGCCAC CGGAGCGTCG
ACGATCGCGG TGGCCGCGCA CCCGGGCATC GCCCGCACGG GGCTCACCCG CAACCTCATG
CCCCCGGCGC GGGTGTTCAT GGGCCAGCGA CTGGCACCGC TGATGTCGTG GCTGGTCCAG
GAGCCGGAGA TCGGCGCGCT CGCCACCGTC CGGGCCGCCC TCGACCCGGC GGTGCACGCC
GGTGAGTACT ACGGACCGTC AGGGCTCTTC CGCAGCACCG GTCCGCCCGC TGTCGGGCGA
TCCAGCGCCC GCTCGCGCGA CGCCCGCCAG CAGCAGCGGC TGTGGGCGGA GTCCGAGCGG
CTCACCGGCG TCACTTACGA CTTCGATCCC TCCTCGGGGA CAGGGCCCGG CGGTGTCGGA
TCCTGGAGGA ACAACGGGAG AAGCGCGTCG CGGAGCGCGG AACTGACCTG A
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| Protein sequence | MRPGARDAGW SLADVPDQRG RTAVVTGANS GIGFEAAKAL AERGATVVLA CREPARAEQA
AARIRAAAPR ADVHVEPLDL ISMTSVRAAA ERIRAAHPRL DLLVNNAGVM LPSPGPGGAA
LGAGFGDDGL GDHGIEPTFG VNHLGHFALT GLLLDRLLAT PHSRIVTVSS LAHLVGRLDL
EQLRRLPPHA DRPGGSPPVV VPDQRAGSPS EPPLASPARQ RSQRRSETQR RSETQRRSET
QRGSGTPRAQ GMQRLQSLQG TRGPQSRRLP RQRLPYPTSK LANLMFTFEL QRRLAATGAS
TIAVAAHPGI ARTGLTRNLM PPARVFMGQR LAPLMSWLVQ EPEIGALATV RAALDPAVHA
GEYYGPSGLF RSTGPPAVGR SSARSRDARQ QQRLWAESER LTGVTYDFDP SSGTGPGGVG
SWRNNGRSAS RSAELT
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