Gene Franean1_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2023 
Symbol 
ID5670424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2431414 
End bp2431851 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID641240944 
Producthypothetical protein 
Protein accessionYP_001506366 
Protein GI158313858 
COG category 
COG ID 
TIGRFAM ID[TIGR00026] deazaflavin-dependent nitroreductase family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.481727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.406652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTCA CTGGTGAATA CGAACCGAGC CCGGCCGAAT GGGTACGCAA GCAGGTCGAG 
GAGTACGAGA GCTCCGGCGG AACCAAGGGC ACCGAGCTGC GCGGTGTGCC CGTGGTCATC
GTCACCACCC TGGGCGCGAA GTCGGGCAAG ATCCGAAAGA GCCCGGTGAT GCGGGTCGAG
CACGACGGTT GTTATGCCAT CATCGCCTCG CTCGGCGGTG CGCCCAAGCA TCCCGTCTGG
TACCACAACG TCCTCGCCCA CCCCCGGGTC GAGCTACGGG ACGGCACGGT CAACCAGGAC
ATGATCGCCC GCGAGGTGAC CGGTGACGAG AAGGCGCTGT GGTGGGAACG CGCCATAGCG
GTCTGGCCCG ATTATGCGGA CTACCAGAAA AAGACCGACC GGGTGATCCC CGTCTTCGTC
CTGGAACCGG TTTCCTAG
 
Protein sequence
MPLTGEYEPS PAEWVRKQVE EYESSGGTKG TELRGVPVVI VTTLGAKSGK IRKSPVMRVE 
HDGCYAIIAS LGGAPKHPVW YHNVLAHPRV ELRDGTVNQD MIAREVTGDE KALWWERAIA
VWPDYADYQK KTDRVIPVFV LEPVS