| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2022 |
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| Symbol | |
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| ID | 5670423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2430453 |
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| End bp | 2431334 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240943 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001506365 |
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| Protein GI | 158313857 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.270738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCG TGTCCAACAC GCTGGATCTG ACGGCGCTGC GCAGTCTCGT GGCCATCGCC
GACTGCGGTG GATTCCGCCG CGCGGCCGAG GCGTTGTGCA TCTCCCAGTC GGCGGTGAGC
CAGCACGTGC GCCGCCTGGA GAAGGTGGTG GGCCGGCCCC TGGTCGAGCT GGTCGGCCGC
GGCTCCCGGT TCACCCCCGA CGGCGAGCTG CTGCTCTCCG CCGGGCGGCG CATCCTCGCC
ACCCACGACG ACGCGCTGGA GCTGCTCGGA GTGGGCGCGT CCGTCCTACA GCGCCTGATC
ACCGTCGGCT CGACCGAGCA CGCCGCCGAC CACCTGATCC CCCGGGTGAT GGCCGTGCTC
ACCGAGCAGT TCCCGGACGT CGAGGTCAGG TTCCGCCTCG ACCGCGGCGC CCGGCTCGCC
CACGCCCTCG ACCGCGGCAC GCTGGACGTC GCCGTCCTGG TCGGGACGGG CGGAAGCCCC
GCGGGGCGCC CGGCCGGGCT GCTCCCGCTG GCGTGGTACT CGGCCCCCGG CTGGCTCGTC
CCGCCGCCGG ACCGCCCGCT GCCCCTGGTC GCGGTCGACG ACCCGTGCAC GATCCGCACC
CAGGCCCTGA CGACCCTCGC CCGCGCCGGC CGGGTCGCGT CGGTCGTCGG CGAGTCCGGC
TACCTGGCCG GGGTCCTGCA CGCGGCGCGG GCCGGCGTCG GAGTCGCCCT GCTGGCGGAC
GTCGGCCCGC CGCCGCAGGG CCTCGAGCGG CGGGCCGACC TTCCCGCGGT CGACCCCGAG
CCCATGCAGG TCCGGCTACG CCGCGGAGCC TCCCCACAGC TGGCCAGCCT CATCGCCGAC
GCAGTCGCAT GCACCCTCGC CGCCGGCCGC GCCCCCGCCT GA
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| Protein sequence | MAAVSNTLDL TALRSLVAIA DCGGFRRAAE ALCISQSAVS QHVRRLEKVV GRPLVELVGR
GSRFTPDGEL LLSAGRRILA THDDALELLG VGASVLQRLI TVGSTEHAAD HLIPRVMAVL
TEQFPDVEVR FRLDRGARLA HALDRGTLDV AVLVGTGGSP AGRPAGLLPL AWYSAPGWLV
PPPDRPLPLV AVDDPCTIRT QALTTLARAG RVASVVGESG YLAGVLHAAR AGVGVALLAD
VGPPPQGLER RADLPAVDPE PMQVRLRRGA SPQLASLIAD AVACTLAAGR APA
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