Gene Franean1_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2008 
Symbol 
ID5670409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2414054 
End bp2414884 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID641240929 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001506351 
Protein GI158313843 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAGCC ACAGTTTCGA GATAGACGTG GTCGACAAGG TCGCGTGGCT CGTTCTCTCC 
AGGCCGGAAG AACTCAACAC GCTTCAACCA GATTTCTGGC GAGATCTCCC CCTGGCCGTT
TCGAAGATTG ACCAGGGCGG AGGCGTCCGG GTGCTCGTGA TCTCGTCGAC CGGTCGACAC
TTCACCGCGG GCCTGGACCT TAATGTCTTC GGCGGCACGG AGCTTTTTCC GGACGGAGAG
CCGGCTCGTG TCAACATGGC CCGCCGCTCG CTTATTCTTC GCATGCAGGG CGCTCTCACT
GCGCTGGAAC GGGTGCGCTT CCCCGTTCTC GCGGCGGTGC AGGGCGGTTG TGTCGGGGGC
GGCCTCGACC TTGTGACGGC CTGCGACATG CGTTATGCCA CCGTGGACGC GTTTTTCGTT
GTTCAGGAGA CAAAGATCGG AATTACCGCC GATCTCGGCA CACTGCAGCG ACTCCCCAAG
ATAATTCCGG ACGGAGTTGC GCGTGAGCTC GTCTACACCG GTCGTCGACT TCCCGCCGAC
CGTGCGCTCG CCGTCGGCCT GGTGAACGAG GTCTACCCGG ATCAGGAAGC GATGCTGCGC
GGCGTGCGCG AGGTTGCGGA GGAAATTGCC GCCAACAGCC CAATGGCGGT CTGGGGGAGC
AAGGAGATGC TGCTCTACTC GCGCGATCAC CCCGTCGCCG ACGCCCTGGC ACACACGGCA
ACCTGGCAGG CGGGGGCACT CCAGCCAGTA GACGTTACCG AGTCGATTCA GGCCCGGATG
GAGAAGCGCG TCCCGAGCTA CCCGGATCTC CCGTCGACCT CGGATACCTG A
 
Protein sequence
MGSHSFEIDV VDKVAWLVLS RPEELNTLQP DFWRDLPLAV SKIDQGGGVR VLVISSTGRH 
FTAGLDLNVF GGTELFPDGE PARVNMARRS LILRMQGALT ALERVRFPVL AAVQGGCVGG
GLDLVTACDM RYATVDAFFV VQETKIGITA DLGTLQRLPK IIPDGVAREL VYTGRRLPAD
RALAVGLVNE VYPDQEAMLR GVREVAEEIA ANSPMAVWGS KEMLLYSRDH PVADALAHTA
TWQAGALQPV DVTESIQARM EKRVPSYPDL PSTSDT