| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1997 |
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| Symbol | |
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| ID | 5670398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2398637 |
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| End bp | 2399266 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240918 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001506340 |
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| Protein GI | 158313832 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0474929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0514197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTGGTCG ACGCCGCTGG CCGCCAGGCC CAGGCCCGGG AGAACCGCGC CCGGGCGATC
GGTGCGGCCA CCGAGCTGTT CGTCCGGCAG GGCTTCGCGG CGACCTCGAT GGCCCAGATA
GCCGCGGCTG CCGGAGTCTC CACGCCGACC GTCTTCACCT ACTTCTCCTC GAAGATCAAC
CTTCTCAGGG TGGCCGTCGA CGAGGCGGTC GCGGGCGACG ACGAACCGGT CGCCCTGCAC
GAGCGGCCGG CCATACGGGC CGTCCACGAC GGCGCCACGG CCGGCGAGGT GCTCGGCGCG
TTCGCGGTGG CCGCGACGGA GATCGCGCAG CGCGCCTTCC CGCTGCTGTC GGCACTGCGC
CGGGCCGCGG ACGTCGATCC GCAGGCCGGC GAGCTCGCGC GACCTCGAAC ACCAGCGCCT
GACCGGAGCG GGCATCGTCG CGACGACCGT CGCCGATCGC CTGGGCACAG CCGCCGCGGA
CGACGTCGAG CGCATCCGCG ACACGCTCTG GACGATCTTC TCCCCGGATG TCTACGGCCT
ACTGGTCCGC GAGCGCGGGT GGTCCCACGA CGCCTACCGC GAGTGGGTGA CAGGCGACGT
GCACCGGCGA CGTGCGCTAT CATTCCCTAA
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| Protein sequence | MLVDAAGRQA QARENRARAI GAATELFVRQ GFAATSMAQI AAAAGVSTPT VFTYFSSKIN
LLRVAVDEAV AGDDEPVALH ERPAIRAVHD GATAGEVLGA FAVAATEIAQ RAFPLLSALR
RAADVDPQAG ELARPRTPAP DRSGHRRDDR RRSPGHSRRG RRRAHPRHAL DDLLPGCLRP
TGPRARVVPR RLPRVGDRRR APATCAIIP
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