Gene Franean1_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1996 
Symbol 
ID5670397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2398039 
End bp2398455 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content70% 
IMG OID641240917 
Productalpha/beta hydrolase 
Protein accessionYP_001506339 
Protein GI158313831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.113138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.051716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAGG ACCTCACGAT TTCCAACGGG GCGATACCCG ACGAGCTCGA ACAGGTGGGC 
GCCGTATCCG TCCTCGTCTG CTCACCGGAG GGTCCTCTGG TCCGTGTCGA GCAGGACGCT
CTGGACATCA TCGGCACCGC GATGTACCTG CGGGCCGCGT GGGCGGCGGT CCCGGTCACG
CGGCTCACGC CGGAGTTCTT CGAGCTCCGC AGCGGCCTGG CCGGCCAGAT CCTGCAGAAG
TTCGTCAACT ACCAGATCGG GCTGGCCGTG GTGGGGGACA TCTCGGCGTT CACGGCGGCG
AGCGGCGCCC TGCGGGACCT GGTGCGCGAG TCCAACCAGG GAGTGCACCA CTGGTTCGTC
CCCGACCTGG ACGCCGTCCG CTCCCGACTC GCCCCGCCCG ACAGGAGCGG CTCCTGA
 
Protein sequence
MAEDLTISNG AIPDELEQVG AVSVLVCSPE GPLVRVEQDA LDIIGTAMYL RAAWAAVPVT 
RLTPEFFELR SGLAGQILQK FVNYQIGLAV VGDISAFTAA SGALRDLVRE SNQGVHHWFV
PDLDAVRSRL APPDRSGS