Gene Franean1_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1990 
Symbol 
ID5670391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2393006 
End bp2394283 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content75% 
IMG OID641240911 
Productmetallophosphoesterase 
Protein accessionYP_001506333 
Protein GI158313825 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.217213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.336367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG TCCACGCCGC GGACATCCAT CTCGACAGCC CCCTTCGGGG ACTGACCCGG 
CTGGGTGACG GCGACCTGGC CCACCTGCTG CGGCAGGCGA CCCGGCGGGC CCTGGCGAAC
CTCGTCGACC TCAGCGTCGA CCGGGCGGCG GACGCGCTCC TGCTCGCCGG GGACGTCTAC
GACGGAACCT GGCGGGACTA CGCGACCGGC CGGTTCTTCG TCGAGCAGAT GGGCCGCCTG
CGCGACGCCG GCATCCCCGT CTACATGATC TCCGGCAACC ACGACGCCGA GAGCGAGATC
ACCCGGTCGC TGACCCTGCC CCCGAACGTC CGGGTGTTCG CCTCGGACCG GCCGGGCACG
CATGTGGCGG ACGACCTCGG GCTGGCCGTG CACGGGCAGA GCTACGCGAC CGCCGCCGTC
CACGACAACC TCGTTCAGCG CTACCCGGAC GCCCTGGCCG GGCTGGTGAA CGTCGGCCTG
CTGCACACTG CCGCCGACGG CGCCGAAGGC CATGCCAACT ACGCCCCGTG CTCGGAGGAG
GACCTGGCCC GCACGGGCTA CGACTACTTC GCCCTAGGCC ATGTCCACTC CCATCGCGTC
GTTCACGGCG GCCCACTTCC CGGCGGCACG GCGACCCGCG GGGACGGGCC CGGGGGCCGC
CAGGTCGCCG CGTTCAGCGG CAATCTCCAG GGCCGCACCC CGCGGGAGAG CGGGCCGAAG
GGCGCCCTCG TCGTCGAGAT CCCACAGGAC GGCCCCGCCC GCATCGAGCA CGTCCCCTGC
GACGTGGCCC GCTGGGCTGT CCTCACCGTC GACACCGCCG GCGCCGACAC CCTCGACGAC
GTCCTGGGCC GGGTCACGGC CGAGCTGCGG GCGGCGCGGG ACTCCGCGGG GGACCGTCCG
GTCGTCGCGC GCACCGTGCT CACCGGCGCG TCGAGGGCCG CCGCGGGTCT TGCCGACGCC
GAACGGCTAC GCGAGGAGCT CCGCACGGTC GCCGACGGCC TGCAGGTCTG CCTGGAGAAG
ATCGTCAACC GGGTGACCGA CCCGCGGCCG GCCGGCGCCG TCGACCCCGA GCTGGTCTCC
GCCGTACGCG CGGCCTGCGA CGATCTGGGC ACCCGCCCCG AGGACCTCGC GCGGTGGATC
GGCCCCCTGG ACCGCGAGGT CGGACGGCTG CTACGCGGAG CCGACCTGCT CGACCTGGGC
GATCCCCGCA CACTCGCCGA CCTCGCCCGC CGCGCCGGGG ACGGCCTGCT CGCGCGCCTC
TCCGGAGACG ACGCCTGA
 
Protein sequence
MRLVHAADIH LDSPLRGLTR LGDGDLAHLL RQATRRALAN LVDLSVDRAA DALLLAGDVY 
DGTWRDYATG RFFVEQMGRL RDAGIPVYMI SGNHDAESEI TRSLTLPPNV RVFASDRPGT
HVADDLGLAV HGQSYATAAV HDNLVQRYPD ALAGLVNVGL LHTAADGAEG HANYAPCSEE
DLARTGYDYF ALGHVHSHRV VHGGPLPGGT ATRGDGPGGR QVAAFSGNLQ GRTPRESGPK
GALVVEIPQD GPARIEHVPC DVARWAVLTV DTAGADTLDD VLGRVTAELR AARDSAGDRP
VVARTVLTGA SRAAAGLADA ERLREELRTV ADGLQVCLEK IVNRVTDPRP AGAVDPELVS
AVRAACDDLG TRPEDLARWI GPLDREVGRL LRGADLLDLG DPRTLADLAR RAGDGLLARL
SGDDA