| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1988 |
|---|
| Symbol | |
|---|
| ID | 5670389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2387905 |
|---|
| End bp | 2388768 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641240909 |
|---|
| Product | prephenate dehydratase |
|---|
| Protein accession | YP_001506331 |
|---|
| Protein GI | 158313823 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.630591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.549246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGA GTCAGAAGAT CGCATATCAG GGCGAGCCGG GAGCCAACTC CCACATCGCC
TGCCGCGACG TCTACCCCGA CTTCGAGGCG GTACCGTTCC AGACCTTTGA GGAGTGCTTC
ACCGCGCTGG AGGACGGCAC GGTCGGTCTG GCGATGATCC CGGTGGAGAA CTCGACCGCG
GGCCGGGTCG CCGACATCCA CCATCTGCTG CCGAACTCGT CCGTGCACAT CATCGGTGAG
TTCTTCCTGC CCATACGCCA TCAGCTCCTC GGGCTGCCGC GGGCGACCAT GGACGATCTG
AAGACCGTGC ACAGCCATCC GCAGGCCCTG GCCCAGTGCC GCAACGCGAT CCGCGGGCTC
GGGCTCACCG CCGTGCCCGC CGCGGACACC GCGGGCAGCG CCCGCGAGGT CGCCGAGTGG
GGTGACGTGA CGAAGGCTGC CGTCGCCTCG CGGCTGGCAG CCGAGGAATA CGGCCTGCAG
GTGCTCCGGC CCGACCTCGA GGACGAGGAT CACAACACGA CCCGCTTCCT CATCCTGTCG
AACGAGCGCC TGCGGGCCGC GGCCGGCGTC GGACCGATCG TGACCACCTT CGTGTTCAAG
GTGCGCAACA TGCCGGCCGC GCTGTACAAG GCTCTCGGCG GTTTCGCCAC CAACGGCATC
AACATGACGA AGCTCGAAAG CTGCATGATC AGCGGCGAGT TCGTGGCGAC GCAGTTCCTC
GCCGACATCG AGGGCAGCCC GGAGGATCCC GCGGTGGAAC GCGCCTTCGC CGAACTCGGC
TTCTTCGCCG ACTACCGCAT CCTCGGTGTC TACCGCGCCA GCCGATACCG CGAGCGGTTC
GACCCCCTGC GACTGAGCTC GTAA
|
|---|
| Protein sequence | MTGSQKIAYQ GEPGANSHIA CRDVYPDFEA VPFQTFEECF TALEDGTVGL AMIPVENSTA
GRVADIHHLL PNSSVHIIGE FFLPIRHQLL GLPRATMDDL KTVHSHPQAL AQCRNAIRGL
GLTAVPAADT AGSAREVAEW GDVTKAAVAS RLAAEEYGLQ VLRPDLEDED HNTTRFLILS
NERLRAAAGV GPIVTTFVFK VRNMPAALYK ALGGFATNGI NMTKLESCMI SGEFVATQFL
ADIEGSPEDP AVERAFAELG FFADYRILGV YRASRYRERF DPLRLSS
|
|---|
| |