Gene Franean1_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1987 
Symbol 
ID5670388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2387068 
End bp2387898 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content72% 
IMG OID641240908 
ProductPhzF family phenazine biosynthesis protein 
Protein accessionYP_001506330 
Protein GI158313822 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.3632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.520518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGAG CGTTCCAGCA GGTGGACGTC TTCACGTCCG GCAGTTGCCT GGGCAATCCC 
GTCGCGGTCG TCCTCGACGC CGAGGGACTG CCCAGTGCGG CGATGCGCCG CTTCGCCGCC
TGGACGAACC TTTCCGAGAC AACGTTCGTC CAGGCCCCGA CGGCACCCGG GGCCGACTAC
CGGGTGCGCA TCTTCACGCC GACGGCCGAG CTTCCGTTCG CGGGTCATCC CACCCTGGGG
ACATGCCACG CCTGGCTGAC ATCCGGCCAC ACGCCGCGCG ATCCCGACCG GATCGTGCAG
GAATGTGAGG CGGGGCTGAT CACCGTCCGT CGCGACGACG CCTCGGGACT GGCCTTCTCG
GGACCGCCGC TGCTGCGTTA CGAGCCCGCC GACGCCGAAC TCGTGCGGCA CCTCGCCGAG
ATGCTCCGCC TCGACCCGGC GGACATCCTC GCCGCGCAGT GGGTGGACAA CGGCCCGGGC
TGGGTCGGCG TGCTGCTCGA CTCCGCCGCG GCCGTGCTCG CGATCCGCCC GGGCGCCGTC
GACCTGGCCG TGGGGGTTGT CGGGCCACAC CCGCCCGGCG GGCCGGGCGC CTTCGAAGTC
CGCGCCTTCA CGCCCCAGAT CACCACTGTC GAGGACCCGG TGACCGGCAG CCTCAACGCC
TCCCTCGCGA CCTGGCTGTT CGACATCGGC AAGGCGGACG GGGCGTACGT CGTCAGCCAG
GGGACGATGC TCGGGCGGGA GGGCAGGGTC CGTCTGTCCC GTGATCCGGA CGGGTCGGTG
TGGGTCGGTG GCGACACTGT CACCTGTATC TCGGGGACCG TGGACCTCTG A
 
Protein sequence
MRRAFQQVDV FTSGSCLGNP VAVVLDAEGL PSAAMRRFAA WTNLSETTFV QAPTAPGADY 
RVRIFTPTAE LPFAGHPTLG TCHAWLTSGH TPRDPDRIVQ ECEAGLITVR RDDASGLAFS
GPPLLRYEPA DAELVRHLAE MLRLDPADIL AAQWVDNGPG WVGVLLDSAA AVLAIRPGAV
DLAVGVVGPH PPGGPGAFEV RAFTPQITTV EDPVTGSLNA SLATWLFDIG KADGAYVVSQ
GTMLGREGRV RLSRDPDGSV WVGGDTVTCI SGTVDL