Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1981 |
Symbol | |
ID | 5670382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2380546 |
End bp | 2381100 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641240902 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001506324 |
Protein GI | 158313816 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.74595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCAATCA GATCCCGGGG TGACGCATTC CCGACCCCGC CACCCGAGGT CCCGCTGCCT GCCGCATCCG CGGTCGCGGG CACCGCGGTG TCCTGGCTGA CTCAGCGGGA GCAGCGCGTA TGGCGGCGCT ACCTGCTCAT GGCCAGCCAG CTCACCGTGT GGATGAACCG CCAACTCGCC GCGGAGGCGG GGATCTCACT CGCCGACTAC GACGTTCTCG TCCGCCTCAC CGACACCCCC GAAGGGCGCC TGCGGGTGAC CAAGCTGGCC AGGGAGCTCT CGTGGGAGCA GAGCAGGCTC TCCCATCACG TCGCCCGGAT GCAGCGGCGT GGCCTCGTGG CGCGCGAGGA GTGCGCCGAC GACGGCCGCG GCGCCCTCGT CGTGCTCACG GAGCGCGGCC GCGCCATGAT CGAACAGGCC GCTCCCGCTC ATGTCGCTTT CGTCCGTGAG CATGTGTTCG ACATGCTCAC GGAAGCCCAG GTCGACGCCC TCGACGCGAT CGCCACGTCA GTACTGACCC GGCTCGCCGC GGACGACCAC CCGTCGTCCG CCTGA
|
Protein sequence | MSIRSRGDAF PTPPPEVPLP AASAVAGTAV SWLTQREQRV WRRYLLMASQ LTVWMNRQLA AEAGISLADY DVLVRLTDTP EGRLRVTKLA RELSWEQSRL SHHVARMQRR GLVAREECAD DGRGALVVLT ERGRAMIEQA APAHVAFVRE HVFDMLTEAQ VDALDAIATS VLTRLAADDH PSSA
|
| |