Gene Franean1_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1981 
Symbol 
ID5670382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2380546 
End bp2381100 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content70% 
IMG OID641240902 
ProductMarR family transcriptional regulator 
Protein accessionYP_001506324 
Protein GI158313816 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.74595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAATCA GATCCCGGGG TGACGCATTC CCGACCCCGC CACCCGAGGT CCCGCTGCCT 
GCCGCATCCG CGGTCGCGGG CACCGCGGTG TCCTGGCTGA CTCAGCGGGA GCAGCGCGTA
TGGCGGCGCT ACCTGCTCAT GGCCAGCCAG CTCACCGTGT GGATGAACCG CCAACTCGCC
GCGGAGGCGG GGATCTCACT CGCCGACTAC GACGTTCTCG TCCGCCTCAC CGACACCCCC
GAAGGGCGCC TGCGGGTGAC CAAGCTGGCC AGGGAGCTCT CGTGGGAGCA GAGCAGGCTC
TCCCATCACG TCGCCCGGAT GCAGCGGCGT GGCCTCGTGG CGCGCGAGGA GTGCGCCGAC
GACGGCCGCG GCGCCCTCGT CGTGCTCACG GAGCGCGGCC GCGCCATGAT CGAACAGGCC
GCTCCCGCTC ATGTCGCTTT CGTCCGTGAG CATGTGTTCG ACATGCTCAC GGAAGCCCAG
GTCGACGCCC TCGACGCGAT CGCCACGTCA GTACTGACCC GGCTCGCCGC GGACGACCAC
CCGTCGTCCG CCTGA
 
Protein sequence
MSIRSRGDAF PTPPPEVPLP AASAVAGTAV SWLTQREQRV WRRYLLMASQ LTVWMNRQLA 
AEAGISLADY DVLVRLTDTP EGRLRVTKLA RELSWEQSRL SHHVARMQRR GLVAREECAD
DGRGALVVLT ERGRAMIEQA APAHVAFVRE HVFDMLTEAQ VDALDAIATS VLTRLAADDH
PSSA