Gene Franean1_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1977 
Symbol 
ID5670378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2376648 
End bp2377727 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content71% 
IMG OID641240898 
Productmethyltransferase type 11 
Protein accessionYP_001506320 
Protein GI158313812 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.166112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.347067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATG GGGTGGCCGG CATGTACCGG GCCGGCAGCG GCCGGGGACC GGCGGACTTC 
GTGGCCAGGC GCGTGAACGG CCTGCTCGCA GAGGACCCGC GGGCGGCTAT GCGACGCGCG
GCCGGCGCGG CCTACCGGGT GGCCGGCCGG GCCGGACGAG CCGCGCTGCG TCCGTCGGAG
ACACGGGACC TCGGCGGGGT GCTGACAGAC ACGGCCGCAC CGGAAGCCGG AACCGACGGT
CTCGACGGCT CGGACGACCT CGGCGGCGAG CGCCGCCCGG CGCCGGACCC GGAGATCCCA
CCATGGGTTC CGCTCGGCGA CGAGGGCCCG GTGATCTGTA ACATCTGCCG GTGGCACGGC
GAGGAGTTCG ATCTTGCCGG CCATGTCGAG ATGTCGCTGT GCCCGTCCTG TGGTGCCAAC
GGGCGTGACC GGTTCATGCA CTGGTGCCTG GCCCAGTCGG TGGATCTCAA CCCCGCGCTT
CGGGTCATCG AGTGCAGTCC GCGTCTCGGC GAGGACTACC GTTCGGCGAT GTCCAGCTGG
TTCTTCTACC GGACGTCCGA TCTGGACATG CGCGCGCACC GCGGCAGCAT CCGGCTCGAT
CTGCAGGCGA TTGACCTGCC GGACGCGTCG CTGGACGTCA TGCTGTGCTC GCACGTGCTC
GAGCACGTTC CGGACACGGA CAGTGCGCTG GCGGAGCTTC GCCGGGTGAT CGCCCCGGGC
GGGCACCTCA TCCTGCAGGT CCCGGTCGGC CAGGGGGTGA CCGCGCCGCC GACGGAACCC
GAGTTCCACA TGGACTGGAC CCCGGTCTTC TGGCGCTTCG GGTTCGATCT GACCGAGCGG
CTACGCAAAT CCGGGTTCGA GGCGGACCTG CTGTGCACCG CGTCGATGCT CGAGGCCGCG
CTGACCGGGG AGAACCTGTG GCCCGACTGG TCCCGGGAGT TCGACGTCCC CGGAATGCTC
GACGGGGTGA TCGCCGCGGA CCTGAAGGTC ATCGCCGACC GAGCGGCCGA GCACCGGCTC
GGGATCAGCC CGGGCTACAT GTACTTCACG TGGCACTGCC GCGTGCCGGC GCACGAATAG
 
Protein sequence
MEHGVAGMYR AGSGRGPADF VARRVNGLLA EDPRAAMRRA AGAAYRVAGR AGRAALRPSE 
TRDLGGVLTD TAAPEAGTDG LDGSDDLGGE RRPAPDPEIP PWVPLGDEGP VICNICRWHG
EEFDLAGHVE MSLCPSCGAN GRDRFMHWCL AQSVDLNPAL RVIECSPRLG EDYRSAMSSW
FFYRTSDLDM RAHRGSIRLD LQAIDLPDAS LDVMLCSHVL EHVPDTDSAL AELRRVIAPG
GHLILQVPVG QGVTAPPTEP EFHMDWTPVF WRFGFDLTER LRKSGFEADL LCTASMLEAA
LTGENLWPDW SREFDVPGML DGVIAADLKV IADRAAEHRL GISPGYMYFT WHCRVPAHE