| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1969 |
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| Symbol | |
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| ID | 5670370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2365089 |
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| End bp | 2366795 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240890 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001506312 |
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| Protein GI | 158313804 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.197678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.851655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCC CGGACGCGTT CGACGAGTTC GGCGCGGAGC GCCCCGGCCG GCTCGAGCTG
GACGAGCTGA TGGCGCAGCT CGTCGAGCGC GCGCATGAGG TGATGACCAC CCAGGGCCGG
CTGCGCGGCC TGCTGCGGGC GCACCGCGCG GTCGCCGCCG ACCTGAGCCT GGAGGTCGTC
CTCCGGCGGA TCGCGGAGGC CGCCTGCGAG CTGGTCGACG CCCGCTATGG CGCGCTCGGC
GTGATCGCCC GCGACGGCCG GCTCGAACAG TTCATCCACG TCGGGATGGA CGCCGATCTG
GTCGGCCGGA TCGGCCACCT GCCCCGCGGC GAGGGGGTGC TCGGGCTGCT GACCGCCGAG
CCCCGGGCCG TCCGCCTCGA TGACATCGCC GCGCACGAGC ACGCGGTCGG CTTCCCGCCC
GGCCACCCGC CGATGCGCAC GTTCCTCGGC GTCCCGATCA AGGTCCGCAG CGAGGTCTTC
GGGAACCTCT ACCTGACCGA GAAGCGCGGC GGGCGCCGTT TCACCGCGCA GGACGAGGAG
CTCGTCCTGG CCCTCGCCGC GAGCGCCGGC GTGGCGATCG AGAACGCCCG GCTGTTCGGT
GCGGCGCAGC GCCGCCAGCA GTGGCTGCAG GCATCCGCGG ACATCATGCG CCACCTGCTG
GCGGACGGGC CGGAGCCGCT CACGCTGATC GTCGCGCGGG CCCGCGAGGT CGCCGACGCC
GATCTGGCGT GCGTCCTGCT CGCCGACGGA GCGACCGAGG AGCTGCTCGT CGACGCGGCC
GACGGCCCGC AGGCCGACCG CCTCCTGGGC GAGTCCGTTC CGATGGCCGG AACCCTCGCC
GGCCGGGCGG TCGCGGCCGG GCGGCCCCTG CTGGTCGACG ACGCCGCGGC CGAGCCGGGC
GTCACCGGCT TCGGTGGCCT CGACATCGGC CCGCTGATGG TCATCCCCCT GGTCGGGGCG
CAGGTCGGGA CGGGCGCGGT CGTGCTGGCC CGGGGGCCCG CGGGCCGGCC GTTCGCCGAC
GGCGATCTGG ACATGGCGGC GACGTTCGCC GGGCATGTGC AGGTCGCCCT CGGCCTGGCC
GCGTCCCGGG CCACCCGTGA CCGGCTGCTC GTCCTGGAGG ACCGCGACCG GATCGCCCGC
GACCTGCACG ACCACGTCAT GCAGCGGCTC TACGCCGTCG CGCTGGGTCT GCAGGGGATG
GCGGCCGCCG AGGAGCGCCC GCAGTCCGCC GGCCGGCTCA CCACCTACGT CGACGACCTC
GACGCGACCA TCCGGGAGAT CCGCTCGACG GTCTTCGAGC TGCGCGGGCG GCGCAGCACC
GGCGGGCCGG GCGTGCGGGC CCGCCTCGGC GAGATCGTCG AGGAGGTCGC CGAGGCGCTC
GGCTTCAGCC CGCGCCTGCG GGTGGACGGC CCGCTCGACA CCGCGCTGGA GGGGAACATC
GCCGACCATC TCCTCGCCGT CGCGCGGGAG AGCCTGTCGA ACGTGGCGCG CCACGCCCGC
GCCAGCCGGG TGGAGCTGTC GGTCACCGTC GGCCAGGGCT GGCTGTGCGC CGAGGTCACC
GATGACGGGG TCGGGCTGGG CGACACCGGC CGGCGCAGCG GCCTGCGCAA CCTGCGCAGC
CGCGCCGAGG AGCTCGGCGG GACCTTCGAC ATCGCCCCCG GCCCGTCCGG CGGCACCCGG
CTGCGCTGGG CGGTCCCGCT GCCGTAG
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| Protein sequence | MDVPDAFDEF GAERPGRLEL DELMAQLVER AHEVMTTQGR LRGLLRAHRA VAADLSLEVV
LRRIAEAACE LVDARYGALG VIARDGRLEQ FIHVGMDADL VGRIGHLPRG EGVLGLLTAE
PRAVRLDDIA AHEHAVGFPP GHPPMRTFLG VPIKVRSEVF GNLYLTEKRG GRRFTAQDEE
LVLALAASAG VAIENARLFG AAQRRQQWLQ ASADIMRHLL ADGPEPLTLI VARAREVADA
DLACVLLADG ATEELLVDAA DGPQADRLLG ESVPMAGTLA GRAVAAGRPL LVDDAAAEPG
VTGFGGLDIG PLMVIPLVGA QVGTGAVVLA RGPAGRPFAD GDLDMAATFA GHVQVALGLA
ASRATRDRLL VLEDRDRIAR DLHDHVMQRL YAVALGLQGM AAAEERPQSA GRLTTYVDDL
DATIREIRST VFELRGRRST GGPGVRARLG EIVEEVAEAL GFSPRLRVDG PLDTALEGNI
ADHLLAVARE SLSNVARHAR ASRVELSVTV GQGWLCAEVT DDGVGLGDTG RRSGLRNLRS
RAEELGGTFD IAPGPSGGTR LRWAVPLP
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