Gene Franean1_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1961 
Symbol 
ID5670362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2357713 
End bp2358213 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content72% 
IMG OID641240882 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001506304 
Protein GI158313796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0230809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGGG GCGAGGTGGA GGCCACCGAG CCCGAGTTCA CCCGGACGGT ACGTGATCGG 
TTCGGAACCT TCCGTCATCA CGTGCTGGCG ACACTGCGGG CCGACGGCTC GCCCCGGGTC
AGCGGGCTCG AGGCCGAGTT CCGCATGGGC GAGCTGTGGC TGGGCGGGAT GCCGGGCGCG
CGCAAGTCGG ACGACCTGCT CCGCGACCAG CGGTTCGCGC TGCACGCGAA CCCCGGCCCC
GGAACCGACA TGCACGGCGG GGACGTCCGG ATCGCCGGCC GGGCCGAGTG GGTGGACGAT
CCGGACACGC GCCGGCGCTT CGTCGAGGAG GTTGATCCGC CGACCCCGTT CGACCTGTTC
CGCGTACGGA TCACCGAGAT CGTCCGCATC TGGATGGACG GCCAGGAGAT GGTCATCGAG
ACCTGGCGGC CCGACGGCCG CGGCCTGCGG GTGCTGCGCC GGGGCAACGA CACTCCGGTC
CGCGAGCAGT CCGGCACGTG A
 
Protein sequence
MSWGEVEATE PEFTRTVRDR FGTFRHHVLA TLRADGSPRV SGLEAEFRMG ELWLGGMPGA 
RKSDDLLRDQ RFALHANPGP GTDMHGGDVR IAGRAEWVDD PDTRRRFVEE VDPPTPFDLF
RVRITEIVRI WMDGQEMVIE TWRPDGRGLR VLRRGNDTPV REQSGT