| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1944 |
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| Symbol | |
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| ID | 5670345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2335352 |
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| End bp | 2337574 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240865 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001506287 |
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| Protein GI | 158313779 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.132442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGA TCCCCGACTT CGCCGAGATC GCGCTCGGAG CACCCAGCGG CGCGGACGCC
GACGAGGCCC AGTGGCGGGT CGCGCTCGAG CAGGCCACCG GCAAGGACGC CGACGCGCTG
ACCTGGGACA CCCCCGAGGG CATCGCGGTG AAGCCGCTGT ACACCGCGGC CGACACGGCC
GGCCTGGACT TCCTCGGCAC CTACCCGGGC ATCGCCCCCT ACCTGCGCGG CCCGTACCCG
GCGATGTACG TGACCCAGCC GTGGACGATC CGCCAGTACG CGGGGTTCTC CACCGCGGCC
GAGTCGAACG CCTTCTACCG ACGCAACCTG GCCGCCGGCC AGAAGGGCCT CTCGGTGGCC
TTCGACCTGC CGACCCACCG CGGGTACGAC AGCGACCACC CGCGGGTCAC CGGCGACGTG
GGCATGGCCG GCGTGGCCAT CGACTCGATC TACGACATGC GCCAGCTCTT CGACGGCATC
CCGCTGGACC GGATGAGCGT GTCGATGACC ATGAACGGCG CGGTGCTGCC GGTCCTGGCG
CTGTACATCG TCGCCGCCGA GGAACAGGGG GTGGCACCGG AGCAGCTCGC CGGCACCATC
CAGAACGACA TCCTCAAAGA GTTCATGGTC CGCAACACCT ACATCTACCC GCCGCAGCCG
TCGATGCAGA TCATCTCGGA CATCTTCGCG TACACGTCGA AGCGGATGCC GCGATTCAAC
TCGATCTCCA TCTCCGGCTA CCACATGCAG GAGGCGGGCG CGACCGCCGA CCTGGAGCTC
GCCTACACGC TGGCGGACGG CGTCGAGTAC ATCCGGGCGG GTCTGGGTGC CGGCCTGGAG
ATCGACGCCT TCGCCCCCCG GCTGTCGTTC TTCTGGGCGA TCGGCATGAA CTTCTTCATG
GAAGTCGCCA AGATGCGCGC GGCGCGCCTG CTGTGGGCGC GGTTGGTGAA CCAGTTCGGC
CCGACCAGCG CCCGTTCGAC GTCGCTGCGG ACGCACTCGC AGACCTCCGG ATGGTCGCTG
ACCGCCCAGG ACGTCTTCAA CAACGTCGTG CGCACCTGCG TCGAGGCGAT GGCCGCCACC
CAGGGGCACA CCCAGTCGCT GCACACCAAC GCCCTCGACG AGGCGCTGGC GCTGCCCACC
GACTTCTCCG CCCGCATCGC GCGCAACACC CAGCTGCTGC TCCAGCAGGA GTCCGGTACC
ACCCGGGTCG TCGACCCGTG GGGCGGCAGC CACTATGTCG AGCGGCTCAC CTACGACCTG
GCCCGCAAGG CCTGGGCGCA CATCACCGAG GTCGAGTCGA CCGGCGGGAT GGCGCAGGCG
ATCGACGCCG GCATCCCGAA GATGCGCATC GAGGAGGCGG CGGCGCGCAC CCAGGCCCGC
ATCGACGCCG GACGCCAGCC GCTCGTCGGG GTCAACAAGT ACCGGGTGGA CGCGGATGAG
GCCATCGACG TCCTGAAGGT CGACAACTCG GCGGTCCGGG TCGGTCAGAT CGAGAAGCTG
CGCCGGCTGC GCGAGGAACG TGACACCGCC GCCGTCGAGT CGGCGCTGCA CGCGCTGACC
GCCGCGGCCG ACGCGGCCCG CGACGGCAGC CGGCCGTCCG ACCTGGGGCA CAACCTGCTC
GCGCTGGCAG TCGACGCCGC CCGCGCCAAG GCGACCGTGG GTGAGATCTC CGACGCCCTG
GAGAAGGTGT ACGGGCGGCA CTCCGGTCAG ATCCGTACGA TCTCGGGTGT GTACCGGGAT
GAGGCCGGGC CAGCCGGCAA CATCGTCGCC GCCCGCGAGG CCGCGGCGGC CTTCGAGCGG
GCCGAGGGCC GGCGCCCACG GATCCTCGTC GCGAAGATGG GGCAGGACGG GCACGACCGC
GGCCAGAAGG TGATCGCCAC GGCCTTCGCC GACATCGGCT TCGACGTGGA CGTCGGCCCG
CTGTTCCAGA CGCCGGCCGA GGTGGCCCGC CAGGCCGTCG AGGCGGACGT CCAGATCATC
GGCGTGTCCT CGCTCGCCGC CGGGCACCTC ACGCTGGTCC CGGCGCTGAA GGAGGAGCTG
GCGGCGCTCG AACGCGACGA CATCCTCGTC GTCGTCGGCG GGGTCATCCC GCCGCAGGAC
TTCGACGCGC TGCGCGCCGC CGGTGCCGCC GCGATCTTCC CGCCTGGCAC GGTCATCGCG
GACGCGGCGA TCGAGCTGCT GGCCACGCTG TCCGACCAGC TCGGCCACAC CGCGGCGCCT
TGA
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| Protein sequence | MSSIPDFAEI ALGAPSGADA DEAQWRVALE QATGKDADAL TWDTPEGIAV KPLYTAADTA
GLDFLGTYPG IAPYLRGPYP AMYVTQPWTI RQYAGFSTAA ESNAFYRRNL AAGQKGLSVA
FDLPTHRGYD SDHPRVTGDV GMAGVAIDSI YDMRQLFDGI PLDRMSVSMT MNGAVLPVLA
LYIVAAEEQG VAPEQLAGTI QNDILKEFMV RNTYIYPPQP SMQIISDIFA YTSKRMPRFN
SISISGYHMQ EAGATADLEL AYTLADGVEY IRAGLGAGLE IDAFAPRLSF FWAIGMNFFM
EVAKMRAARL LWARLVNQFG PTSARSTSLR THSQTSGWSL TAQDVFNNVV RTCVEAMAAT
QGHTQSLHTN ALDEALALPT DFSARIARNT QLLLQQESGT TRVVDPWGGS HYVERLTYDL
ARKAWAHITE VESTGGMAQA IDAGIPKMRI EEAAARTQAR IDAGRQPLVG VNKYRVDADE
AIDVLKVDNS AVRVGQIEKL RRLREERDTA AVESALHALT AAADAARDGS RPSDLGHNLL
ALAVDAARAK ATVGEISDAL EKVYGRHSGQ IRTISGVYRD EAGPAGNIVA AREAAAAFER
AEGRRPRILV AKMGQDGHDR GQKVIATAFA DIGFDVDVGP LFQTPAEVAR QAVEADVQII
GVSSLAAGHL TLVPALKEEL AALERDDILV VVGGVIPPQD FDALRAAGAA AIFPPGTVIA
DAAIELLATL SDQLGHTAAP
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