| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1943 |
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| Symbol | |
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| ID | 5670344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2333391 |
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| End bp | 2335352 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240864 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001506286 |
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| Protein GI | 158313778 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.133903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC CACCGGTGGA GCTGGCGCTC GCCGCCGATT TTCCGGACTC GACGAGGGAC
GACTGGCGGC GGCTGGTCCT CGGGGTGCTG CGAAAGTCGG GGGTTGCGGG CGAGGACACC
GCTCCGGGTG AGGCTGAGGA GCTGATCGCG ACCTCGACCT ACGAGGGCAT CCGCATCCGT
CCGCTCTACG ACGCGGCGGA CGCCGCCGGC GCGGCCGGCG CGGGCCTGCC GGGGCTGGCG
CCGTTCGTCC GCGGCGGCCG GCCACAGGGC GCCAACACCG ACGGCTGGGA CGTCCGTGCG
CTGCACGCCC ACCCCGGCCC GAAGGCCGGC GGCCAGGCGG TGCTCGCCGA CCTGGAGAAC
GGCGTCACCT CGCTGTGGCT GCGGCTCGGT CCGGCGGGCC TGCCTCTCGA CGGGCTCGCC
GAGATCCTGC GGGATGTCTA CCTCGACCTC GCTCCGGTCG TCCTGGACGC GGGCACGCTC
ACCGGGGAGG CGGTCGCCGC GTTCCTGGCG CTGGCCGACG AGCGGGGTGT TCCGGCGTCC
CAGCTCACCG GCGTGCTCGG CGCGGACCCG CTGGGGCTCG CGGCGCGCAC CGGGGCGGCG
CCGGACTTCA GCGTGGCCCG CGCGCTCGCC CCACGCGTCG CCGCCGAGTA CCCACGCCTG
CGGACGCTGG TCGTCGACGC CCGGCCGTAC CACGACGCCG GCGGGAGCGA CGCCGAGGAG
CTCGGCGCCT CGTTGGCGAC CGGTGTGGCC TACCTGCGCG AGCTGACCGA CGCCGGGCTG
GGCGTGGCCG AGGCCCTCGG CCAGCTCGAG TTCCGCTACG CGGTGAGCGC CGACCAGTTC
CTGTCGATCG CCAAGCTGCG GGCGGCGCGG CGGCTGTGGG CCCGGGTGGC GGAGGTGTGC
GGTGCCGCGC CCGCGGAGCG GGTGCAGCGT CAGCACGCGG TCACCTCGTC CGCGATGATG
TCCCGCCGTG ACCCCTGGGT GAACATGCTC CGCACCACCG TGGCCTGCTT CGCGGCGGGG
GTCGGCGGCG CGGACGCGGT CACCGTGCTG CCCTTCGACG TCAGGCTCGG GCTCGCCGAC
GACTTCGCCC GTCGGATCGC GCGGAACACG CAGACGCTGC TGCAGGAAGA GTCGAGCCTG
ATCCGGGTGA TCGACCCGGC CGGGGGCTCC TGGTACGTCG AGTCGCTCAC CGACTCCCTC
GCCGAGGCGG CGTGGGCGGT CTTCACTGAG ATCGAGCGTG CCGGAGGGAT CTCGGCCACG
CTGGCGGACG GCTCGCTGCG GGCCCGCCTC GCCGCGACCT GGGCGGCCCG TGCGGACGCG
ATCGCGCACC GGCGTGATCC GCTGACCGGC GTCAGCGAGT TCCCCAACCT GGGTGAGAAG
CTCCCCGAGC GGCCGCCCGC CCCGGCGGAG ACCGGCCCGT CCGGCGCCAC GGCCGCGACC
GGCACGACCG AGGCCGGCAC GACGGCGACC GGAACGACCG GGGCCGGTGG CGGCCACGGG
CTGCCGACCG TCACCTACGA CCAGGATTAC GAGGCGCTGC GCGCCCGGTC GGACGCGCAC
ACCGCCGCCA CCGGCGCCCG GCCCGCGGTC TTCCTGGCCA CGATCGGCGG GGCCTCGGCG
TTCACCGCCC GCGCGACCTT CGCCGCGAAC CTGTTCCAGG CCGGCGGCCT GGCCACGCCC
GACTCGGGCC CGGGCACGGA TCCGGCCTCG ATCGCGGCCG CGTTCACCGC GTCCGGCGCG
AAGGTCGCCT GCCTGTGCTC GGGGGACAAG GTGTACGCCG AGTGGGTGGC CCCGGTGGCC
GAGGCGCTGC ACGCGGCGGG GGCCACGCGG GTCTGGCTGG CCGGCAAGGC CGGCTCGCGC
GCGGAGACCG ACGCCGCGGC GGGCGTGAGC GGGTACGTCT TCACCGGCTG CAACGCCGTC
GAGGTGCTGC GGACGACCCT CGCAGAGGCG GGAGTGGCCT GA
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| Protein sequence | MTVPPVELAL AADFPDSTRD DWRRLVLGVL RKSGVAGEDT APGEAEELIA TSTYEGIRIR
PLYDAADAAG AAGAGLPGLA PFVRGGRPQG ANTDGWDVRA LHAHPGPKAG GQAVLADLEN
GVTSLWLRLG PAGLPLDGLA EILRDVYLDL APVVLDAGTL TGEAVAAFLA LADERGVPAS
QLTGVLGADP LGLAARTGAA PDFSVARALA PRVAAEYPRL RTLVVDARPY HDAGGSDAEE
LGASLATGVA YLRELTDAGL GVAEALGQLE FRYAVSADQF LSIAKLRAAR RLWARVAEVC
GAAPAERVQR QHAVTSSAMM SRRDPWVNML RTTVACFAAG VGGADAVTVL PFDVRLGLAD
DFARRIARNT QTLLQEESSL IRVIDPAGGS WYVESLTDSL AEAAWAVFTE IERAGGISAT
LADGSLRARL AATWAARADA IAHRRDPLTG VSEFPNLGEK LPERPPAPAE TGPSGATAAT
GTTEAGTTAT GTTGAGGGHG LPTVTYDQDY EALRARSDAH TAATGARPAV FLATIGGASA
FTARATFAAN LFQAGGLATP DSGPGTDPAS IAAAFTASGA KVACLCSGDK VYAEWVAPVA
EALHAAGATR VWLAGKAGSR AETDAAAGVS GYVFTGCNAV EVLRTTLAEA GVA
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