| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1933 |
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| Symbol | trpA |
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| ID | 5670334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2316180 |
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| End bp | 2317100 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641240854 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001506276 |
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| Protein GI | 158313768 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0945719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.868829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCACG ACCAGTCGGC CCAGCAGGCA TGGGCCCAGG AGCAGCCGGC GCGCGACCAG
CCGGCGCCGA GCCGGCTCGA GCCGTCCGGG CAGCGGCCGG CCCGGCGCGG CGGGCCGAGC
CCGCTGGACG AGGCCTTCGC GGCCGCGCGC AAGGACGGGC GGGCGGTGCT CGTCGGCTAT
CTCCCCGCCG GGTTCCCGAC GGTGGACCGC GGCATCGCGG CGATGCGGGC GATGGTCGCG
GCGGGCGTGG ACGTCGTCGA GGTCGGCCTG CCCTACTCGG ATCCGACGAT GGACGGCCCG
GTCATCCAGG ACGCCGCGGA CACCGCGCTG CGCGGCGGCG TGACCACCAG GGACGTGCTG
CGCACGGTCG AGGCGGTCGC CGAGACCGGG GCCCCCACCC TGGTGATGAC CTACTGGAAC
CCGGTGGAGC GGTACGGCAT GGAGGCGTTC GCCGCCGACC TGGCCGCCGC CGGCGGGGCC
GGGGCGATCA CCCCCGACCT GCCGCCGGAG GAGGCCGGCC CGTGGCTCGC GGCCAGCGCC
ACCCACGGCC TCGACCCGGT CTTCCTGGTC GCGCCGAGCT CGACCACCGA ACGGCTGCGC
CTGGTGACGG CGCACAGCGG CGGCTTCGTC TACGCGGCGT CGACCATGGG CGTCACCGGT
GCGCGCGCCG CCGTCGGTGT GAAGGCGGCC GGCCTGGTCG CCCGGGTCCG GGAGGTGACC
GACCTGCCTG TGGCGGTTGG CCTCGGCGTC AGCACCGGTG CTCAGGCGTC CGAGGTGGCC
GGCTTCGCCG ACGGCGTCAT CGTGGGCTCG GCGCTGGTCC GGGCCCTGGC GGCCGACGCG
CGGGACGGCG CCGACGGCGT CGGTGCGATC GAGCGGCTGG CGGCTGAGCT CGCCGCCGGC
GTGCGTTCGG CCACCGCCTG A
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| Protein sequence | MAHDQSAQQA WAQEQPARDQ PAPSRLEPSG QRPARRGGPS PLDEAFAAAR KDGRAVLVGY
LPAGFPTVDR GIAAMRAMVA AGVDVVEVGL PYSDPTMDGP VIQDAADTAL RGGVTTRDVL
RTVEAVAETG APTLVMTYWN PVERYGMEAF AADLAAAGGA GAITPDLPPE EAGPWLAASA
THGLDPVFLV APSSTTERLR LVTAHSGGFV YAASTMGVTG ARAAVGVKAA GLVARVREVT
DLPVAVGLGV STGAQASEVA GFADGVIVGS ALVRALAADA RDGADGVGAI ERLAAELAAG
VRSATA
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