| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1921 |
|---|
| Symbol | |
|---|
| ID | 5670322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2302064 |
|---|
| End bp | 2303011 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641240842 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506264 |
|---|
| Protein GI | 158313756 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGG ACGAGGCCGC GGCGGCCGCC ACCAGCACGA GCACCGCCAC GCCCGCCACC
GCCGGCACCA GCGCGAGCGG CGCCCGTATG ACCGGCACCC GCACGACGGT GCCCGACAGC
GGCGCGGGTG GCCGGCTCGG GCTGGTGCGG GCGGAGGTGG GCCACTACCT GCTGCTGGTC
GGCGCCGCGT TCCGCTCGGC AGCCCAGTAC CGGCTCTCGC TCGTCCTCTA CACCCTCGTC
GAGATGGCGG CGACGGCGCT GGACCTGGCC GCGATCGGCA TCGTGTTCGC CCACCTGCCC
GACCTGGACG GCTTCTCGCT CGCCGAGGTC GCCTTCCTCT ACGGGACGTC CGCCCTGGCG
TTCGCCATCG CCGAGGCCAC GGTCGGCCCG CTGGACCGCC TCGGATGGAC GATCAAGGAC
GGCAAGCTGG ACCCGATGCT CACCCGCCCG GTCAGCGTGC TCGTGCAGGC CGCGACGGCG
GACTTCTCCC CGCAGCGGCT CGGCCGGGTG GCGCAGCCCG CCGCCGTCCT CGTGATCAGT
CTGGCCGCGC TCGACGTGCC CTGGACCCCC GGCCGGATCG CCGCCGTCCC GGCGATGATC
GCCAGCGGGG TCGTGATCAG CATGAGCCTC GCCGTCGGCA CCGCGGCGGT GCTGTTCGTC
GCCCCGGACG CGACGACCGC CGTGAGCGCT GTCCGCCAGG GCGCGGAGCT CGCGACGCAG
TACCCGCTGA CCGTCTACGG CCGCCGGACG GCGTTGCTGA TGACCGTGGT GCTGCCGATC
GCCTTCGTGA ACTGGCAGCC GGCCCTGTTC GTGCTCGACC GGGCCGACCC GTTCGGCCTG
CCGGGGTTCA CCCGGTTCCT GTCCCCTGCC GTGGCCGTGG TCACCTCGGT CCTCGCCGGG
GCGGCCTGGC GGCTGGGCCT CCGGCACTAC CGCGGCACGG GGAGCTGA
|
|---|
| Protein sequence | MTTDEAAAAA TSTSTATPAT AGTSASGARM TGTRTTVPDS GAGGRLGLVR AEVGHYLLLV
GAAFRSAAQY RLSLVLYTLV EMAATALDLA AIGIVFAHLP DLDGFSLAEV AFLYGTSALA
FAIAEATVGP LDRLGWTIKD GKLDPMLTRP VSVLVQAATA DFSPQRLGRV AQPAAVLVIS
LAALDVPWTP GRIAAVPAMI ASGVVISMSL AVGTAAVLFV APDATTAVSA VRQGAELATQ
YPLTVYGRRT ALLMTVVLPI AFVNWQPALF VLDRADPFGL PGFTRFLSPA VAVVTSVLAG
AAWRLGLRHY RGTGS
|
|---|
| |