Gene Franean1_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1915 
Symbol 
ID5670316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2296137 
End bp2296892 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID641240836 
ProductO-methyltransferase family protein 
Protein accessionYP_001506258 
Protein GI158313750 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0767141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCCA GTTCGGGCAC TGCCCCCAAT TCGGGCACTG CCCCCGCTCC GGGTACCGCC 
CCCGATCCGG GCGCCTCCCC CAATGGCGCA GGCAGGTACG ACGGCAAGTC GGGCTTCCTG
GCGCGGCCGC TGTATGCCTA CCTGATGGCG CACGGCTCCC CGCCCGACGC CGTCCTGAGT
GACCTCGCGG CCGAGACCGC GGCGCTCGGG AGCGTCGCCC GGATGCAGAT TCCCGCCGAG
CAGGGCTCGC TGCTGACGAT CCTGACCGCG GCCCTCGCGC CGTCCCGGGC GATCGAGATC
GGCACGTTCA CCGGCTACTC CGCGCTGAGC ATCGCCCGCG GCCTGCCCGC GGGCGGCCGA
CTGCTGTGCC TCGACGTCAG TGAGCAGTGG ACGTCCGTCG CCCGCCGGTA CTGGGAGCGC
GCCGGGGTGA GCGACCGCAT CGAGCTGCGG CTGGGGCCCG CCGCCGACTC GCTGGCCGCG
CTGCCGGCGG AGCCGGTTTT CGAGCTGGCC TTCATCGACG CCGACAAGAC CTCCTACCCC
ACCTACTACG AGCTGCTGCT GCCCCGGATG AAGCCCAACG GCCTGATCAT CGTCGACAAC
GTCCTGCAGT CCGGCCGGGT CCTCGACGCG GACGTGACGG AGCCGAGCGC CGTCGCCGTG
CGCGCGTTCA ACCGGATGGT GGCCGACGAC CCCCGCGTCC AGGTGGTCAT GCTCCCCGTC
GCGGACGGCC TGACCATCGC CCGCAAGCTG CCGTAG
 
Protein sequence
MSSSSGTAPN SGTAPAPGTA PDPGASPNGA GRYDGKSGFL ARPLYAYLMA HGSPPDAVLS 
DLAAETAALG SVARMQIPAE QGSLLTILTA ALAPSRAIEI GTFTGYSALS IARGLPAGGR
LLCLDVSEQW TSVARRYWER AGVSDRIELR LGPAADSLAA LPAEPVFELA FIDADKTSYP
TYYELLLPRM KPNGLIIVDN VLQSGRVLDA DVTEPSAVAV RAFNRMVADD PRVQVVMLPV
ADGLTIARKL P