Gene Franean1_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1912 
Symbol 
ID5670313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2292428 
End bp2293342 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID641240833 
Productmethyltransferase type 11 
Protein accessionYP_001506255 
Protein GI158313747 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.720989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATATG TCGTCACCCT GCAGAGCACC AGCAAGGAGA TCTCGGCGTT GTCCGCACAT 
TCTTCTGTTC CTTCTTCCTC CACTCAACTC ACCGACCAGA CCGGCGAACC CTCGCCCGAG
TGGTTCACCG AGTTCTTCAC CGAACTGCCG AACGAGTTCT GGCGCCGCGC GGCGACGCCG
GAGATGACCG CCGCCGACGT CGACTTCGTC GAGACGCGCC TCGGGCTCGC GCCGGGGTCG
CGGATTATCG ACGTCCCGTG CGGAAGCGGC CGGCACAGCC TCGCGCTGGC GGAGCGCGGC
CACCGGGTGA CCGGCGTGGA CCTGTCGGCG GAGGCGATCG AGCACGCCCG CCGCGCCGCC
GCGGCCACGG GCACTGCCGT CGAGTTCGTT CTCGGGGACA TGCGGGAGAT CGCCCCGTCG
GGCTCCTTCG ACGCGGCGGT GTGCCTCGGT AACAGTTTCG GCTACCTCAC CCCCGCGCAG
ACCGCGGAGT TCGTCCGTTC CCTCGCCGCG GCGGTGCGCC CCGGCGGGGG CCTCGTCCTC
GACTTCGGCG CGACGGCGGA GTCCGTCCTG CCCGGCTTCA CCGGCGAGGC GCGCGTCATG
CGGACCGGTG ACATCACGAC GGAGGCGACA GTCGACTACG ACGTGGCCCG CAGTCGGATG
CTCAGCAGAT ACCGGTTCAC CCGCGGTGAC GACGTGCTGG ACACCACCGC CGTCCATCAC
GTCTACACAT GCGGGCATAT CGGTGACCTG CTGGGCGCGG CGGGCTTCAC CGACATCGGA
CGCCACTGCG ATCCGGACGG CACGCCCTAC CGGCTGGGCG CCGGGCGCCT GCTGGTCACC
GCGCGCCGGG GCCGGCTACC CGCCGTCCCT TCGGGACCCC AGCCGGTCAT GGACACGGAG
AGTAGTCGCT CCTAG
 
Protein sequence
MTYVVTLQST SKEISALSAH SSVPSSSTQL TDQTGEPSPE WFTEFFTELP NEFWRRAATP 
EMTAADVDFV ETRLGLAPGS RIIDVPCGSG RHSLALAERG HRVTGVDLSA EAIEHARRAA
AATGTAVEFV LGDMREIAPS GSFDAAVCLG NSFGYLTPAQ TAEFVRSLAA AVRPGGGLVL
DFGATAESVL PGFTGEARVM RTGDITTEAT VDYDVARSRM LSRYRFTRGD DVLDTTAVHH
VYTCGHIGDL LGAAGFTDIG RHCDPDGTPY RLGAGRLLVT ARRGRLPAVP SGPQPVMDTE
SSRS