| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1903 |
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| Symbol | |
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| ID | 5670304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2282727 |
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| End bp | 2284526 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240824 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001506246 |
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| Protein GI | 158313738 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC TGCTTCCCGA CGTCCTGCGT GGGCGGGCCG CGCTCGAACC GGAGCGGACG
GCGTACGTCT TCGTGAACGA GCGTGCGGAG GAGACCGGCC GCCTGACCTA CGGCGGGTTG
CACGCCCGCG CGCTGGCCGT GGCCGGTGAG CTGTCCCGGG CCTGCGAGCC CGGTGACCGG
GCGCTGCTGG TGTTCCCGCA GTGCCTGGAC TTCGTCGTCG CGTACCTCGG CTGTCTGTAC
GCGCGGGTGG TCGCGGTGCC CGTCCACCCG CCGCACCGGG ACGGTGTCCA GGACTCCACC
CGCCGGATCG TGGACGACTG CGAGCCGGCC GCGGTTCTCA CGCTCGAGGC GATGGCCCGC
GAGCTCCGGG CCGCCCTGAC CTCGCCGCGC GGCGCGATGT CCTGGATCCC CGTCGACCGG
ATCCCCGCCG GCCCGGCTCC CACGGGCATC CACACCGTGG ACGTCCACGC CGCGGGCCTC
GACCCCACGG ACATCGAGCC CATGGGCCTC GATCCCGCCG ACATCGCGTT CCTGCAGTAC
ACGTCGGGCT CGACGTCGGA CCCCAAGGGG GTCATGGTCT CCCACGGGAA CCTCGCCGCC
AACCAGGAGA TGATCCGGCG GGCCTTCGGG CACGACCGCG ACTCGACGGT GGTCGGCTGG
GCTCCGTTCT TCCACGACCA GGGCCTGATC GGCAACGTGC TGCAGCCGCT GTACGCCGGG
GCCACCTGCG TCCTGATGTC CCCGACCGCC TTCATCCGGT GGCCGATGCT GTGGCTGTCG
CTGATCTCCC AATACCGCGC GCACACCAGC GGCGGCCCGA ACTTCGCCTT CGAGGCCTGC
GTGGCCCGCG CCGCCCGGGG CGGGGTGCCC GATCTCGATC TCAGCTGCTG GAAGGTCGCC
TTCAACGGCG CGGAGCCCGT CCGCCCCGAC ACCCTGCGAC GCTTCGCCGA GACGTTCGCG
CCGCACGGGT TCGACGAGCG GGCGCTCTAC CCGTGCTACG GCCTCGCCGA GGCGACGCTG
CTGGTGACCG GCAGCGAGAA GGGCCGCGGG GCGCGGGTGA TCGAGGCGGC CACCGAGGAC
CTGCGTGCGG GCCGCTACAC GCCGGTGCCC GCGGGCCGCG GCAGCACCCT GGTCGGCTCC
GGGGTCCTCC CCCGGGACGG CGCGCTGCGG ATCGTGGACC CGCGGACGGG ACGCTCTCTC
CCGCCGGACC GGATCGGGGA GATCTGGGTC GCCGGGGACC ATGTCGCGCG GGGCTACTGG
AACCGCCCGT GGGAGAGCAC CGAGACCTTC CGCGCCGAGC ACGCCGACGA GCCCGGCCGC
GGCTACCTGC GCACGGGGGA CCTCGGCCTG GTGGTCGACG ACGAGCTGTT CGTCGTGGGA
CGGCTGAAGG ACCTCGTGAT CATCCGGGGC CGGAACTACT ACCCCCAGGA CCTCGAGCAC
ACCGCGCAGT CCGCGCATCC CGCGCTGCGG CCGGGCGGGT GTGCCGCGTT CTCCGTTCCG
GGTGCCGACC GGGAGAGGCT CGTCATCGTC CAGGAGGTCA GGGGCGAGTT CCGGCGGCGG
GCCGACCCGG GTGAGGTCGC CGGGGCCATC CGGGCCGCGG TGGTGCGTGA GCACCAGGTC
TCCGTCGGGG ATCTCGTGCT GACGCTGCCG GGCCGGCTCC AGAAGACGAC CAGCGGAAAG
ATCATGCGAG CCGCGGCCCG ACGCCGCTAT CTGCGAGACG CCTTCGACCG CTGGACGCCG
CCGACCGGCC CGTCCACCGG CCCGTTTCCC AGCACCGACA ACCCGCATGA GAAGACCTGA
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| Protein sequence | MTTLLPDVLR GRAALEPERT AYVFVNERAE ETGRLTYGGL HARALAVAGE LSRACEPGDR
ALLVFPQCLD FVVAYLGCLY ARVVAVPVHP PHRDGVQDST RRIVDDCEPA AVLTLEAMAR
ELRAALTSPR GAMSWIPVDR IPAGPAPTGI HTVDVHAAGL DPTDIEPMGL DPADIAFLQY
TSGSTSDPKG VMVSHGNLAA NQEMIRRAFG HDRDSTVVGW APFFHDQGLI GNVLQPLYAG
ATCVLMSPTA FIRWPMLWLS LISQYRAHTS GGPNFAFEAC VARAARGGVP DLDLSCWKVA
FNGAEPVRPD TLRRFAETFA PHGFDERALY PCYGLAEATL LVTGSEKGRG ARVIEAATED
LRAGRYTPVP AGRGSTLVGS GVLPRDGALR IVDPRTGRSL PPDRIGEIWV AGDHVARGYW
NRPWESTETF RAEHADEPGR GYLRTGDLGL VVDDELFVVG RLKDLVIIRG RNYYPQDLEH
TAQSAHPALR PGGCAAFSVP GADRERLVIV QEVRGEFRRR ADPGEVAGAI RAAVVREHQV
SVGDLVLTLP GRLQKTTSGK IMRAAARRRY LRDAFDRWTP PTGPSTGPFP STDNPHEKT
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