Gene Franean1_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1892 
Symbol 
ID5670294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2270664 
End bp2271548 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content74% 
IMG OID641240814 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001506236 
Protein GI158313728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.955311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCG ACCCGGCTCG GGGTTTCCAC GACGGCGAAC TGGCGGTGCA GCAGCGGGCT 
GGTGTCGCCC GGGAGGCGGC TCGGCTCGCG GGCATGCTCG GGCCGACCCG GTTGCGCCCC
GGCTCGACGG CTTTCCTGGC AGGTCTGCGG CTAGCGGCGC TGACCGCGCG CGACCGCGCC
GGAACGCTGT GGATCTCGGT CCTGACGGGT CCACCGGGAT TCCTCGACGG TGCCGGGGAG
CTGCTGCGGA TCCGCGCGGC TCCGGCGCCC GGCGACCCGT TGGCCGACCT CGGCGCGGAC
CAGCCGGTCG GGATCGTGGC GATCGATCCA CAGGCGCGGC GCCGAATGCG CGTCAACGGC
ACGTTGATCT CGGCCCGTCC CGGGAGCCTG GTGGTCGAGG TCGGCGAGGC CTACGGCAAC
TGCCCGCAGT ACATCCAGGA GCGCACGATC GGCACGGGGC CGACCCGCCG GACCGAGCAC
CCGGCTCCGC CGGTCGGTGA TCGGCTCGAC GAGGCGGCCA CCCGGATCGT GCGCGCGGCC
GACACCTTCT TCCTCGGCAC CATCCATCCG GAACGCGGTG CCGACGCGTC ACACCGCGGT
GGCCCGGCCG GGTTCGTCCA GGTCGCCGGA GGCGACCTGG CGTGGCCCGA CTACCCCGGC
AACAACATGT TCAACAGTCT CGGCAACCTG CAGGTCGACG ACACGGCCGC GCTGGCCTTC
GTCGACTTCG GCACGGGCGA CACCGTGCAG CTCTCGGGCC GCGCGCACGT GGAATGGGCG
AACCCCGGCC CGGCGGACGA CGACGGCGGA ACCGGCCGGC GCGTGGTCTT CACCGTCTCC
CGGGTGGTCT CGGGTGGCCC GCCGTTGCCG ATCCGCGCTG TCTGA
 
Protein sequence
MTADPARGFH DGELAVQQRA GVAREAARLA GMLGPTRLRP GSTAFLAGLR LAALTARDRA 
GTLWISVLTG PPGFLDGAGE LLRIRAAPAP GDPLADLGAD QPVGIVAIDP QARRRMRVNG
TLISARPGSL VVEVGEAYGN CPQYIQERTI GTGPTRRTEH PAPPVGDRLD EAATRIVRAA
DTFFLGTIHP ERGADASHRG GPAGFVQVAG GDLAWPDYPG NNMFNSLGNL QVDDTAALAF
VDFGTGDTVQ LSGRAHVEWA NPGPADDDGG TGRRVVFTVS RVVSGGPPLP IRAV