| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1884 |
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| Symbol | |
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| ID | 5670286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2262191 |
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| End bp | 2262958 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240806 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001506228 |
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| Protein GI | 158313720 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.631776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACG TGCTGGACCT GTTCCGGCTG GACGGCAGGG TCGCCGTCGT CACCGGCGCC
AGCTCGGGGC TCGGCGTCGG CTTCGCGCGC GCGCTCGGCC AGGCCGGCGC GGACGTCGTG
CTCGCCGCCC GCCGCGCCGA CCGCCTCGAG GAGGTCGTGC GGGACGTGCG CGGGACGGGA
CGGCGGGCGC TCACGGTCAC CACCGACGTC AGCGACCCGG AGCAGTGCAC CGCCCTCGCC
GAGGCGGCGG TCGCCGAGTT CGGCCGGATC GACATCCTGG TCAACAACGC CGGTGTCGGC
ACCGCGGTAC CCGCCCTCCA CGAGCGGCCG GAGGAGTTCC GGCGGATCAT CGACGTCAAT
CTCAACGGCG CCTACTGGGC GGCGCAGGCG TGCGCCCGGG TGATGGAGCC GGGCTCGAGC
ATCATCAACA TCGCCAGTGT TCTCGGGCTC ATCAAGTCCT ACGCACCGCA GGCCGCCTAC
GCCGCCAGCA AGGCCGGGCT GATCGGGCTG ACCCGGGACC TGGCGCAGCA GTGGTCGGGC
CGCCGCGGGA TCCGGGTGAA CGCCATCGCC CCGGGATACT TCGCCTCCGA GATGACGGCA
CAGATCCCAC CAGACAAGCT GATGACGTTC ATCGGCAACA CCAGCCCGCT GCGCCGGCTC
GGCGAGCAGC ACGAGCTGGA CGCGGCGGTG GTCTTCCTGG CCGGTCCGGG AGCTTCCTAC
ATCACGGGAA CGACGCTCGC GGTGGACGGC GGCATGTCCG GCCACTGA
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| Protein sequence | MTNVLDLFRL DGRVAVVTGA SSGLGVGFAR ALGQAGADVV LAARRADRLE EVVRDVRGTG
RRALTVTTDV SDPEQCTALA EAAVAEFGRI DILVNNAGVG TAVPALHERP EEFRRIIDVN
LNGAYWAAQA CARVMEPGSS IINIASVLGL IKSYAPQAAY AASKAGLIGL TRDLAQQWSG
RRGIRVNAIA PGYFASEMTA QIPPDKLMTF IGNTSPLRRL GEQHELDAAV VFLAGPGASY
ITGTTLAVDG GMSGH
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