Gene Franean1_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1871 
Symbol 
ID5670273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2249282 
End bp2249698 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content66% 
IMG OID641240793 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001506215 
Protein GI158313707 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCG TGTCGATCCG CATCATCACC GATGATGTCG CCCGTCTTGT CGGCTTCTAC 
GAGCGCGCGA TCGGCGTGCG GGCGGACTGG TCCAACCAGG ATTTCGCTGA GCTCAGGACC
ACCTGTGCCA CGCTCGCGAT CGCCGGCACC CGCACCGTCG CGCTGTTCGC GCCGGACGCC
GCCCGCCCGT CCGACAACCG TTCCGTGATC GTCGAGTTCC TCGTCGACGA TGTGGACGGC
GTCTACCGGA ACCTGACCGA CGTCGTCGAG GATGTCGTCA GCGAGCCCAC GACTCTGCCC
TGGGGTAGTC GGTCGTTCCT GTTCCGTGAC CCAGACGGCA ACCTCGTCAA CTTCTTCACC
CCGGTGACCC CGGCTGCCAT CGCGAAGTCC GGTCCGTCGC GAGCAGCCTC GAGGTGA
 
Protein sequence
MSFVSIRIIT DDVARLVGFY ERAIGVRADW SNQDFAELRT TCATLAIAGT RTVALFAPDA 
ARPSDNRSVI VEFLVDDVDG VYRNLTDVVE DVVSEPTTLP WGSRSFLFRD PDGNLVNFFT
PVTPAAIAKS GPSRAASR