Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1870 |
Symbol | |
ID | 5670272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2248178 |
End bp | 2249191 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641240792 |
Product | helix-turn-helix type 11 domain-containing protein |
Protein accession | YP_001506214 |
Protein GI | 158313706 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.199317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGAC CGACCGCTCA CGTGCTCACC CTGCTGGAGC TCCTGCAGTC GGGTGGCACC AGGACGGTGG CCGAGCTCGC CGATCGGCTC GGCGTCGACG GGCGCACCGT GCGGCGGTAC GTGCAGCACC TGATCGACCT CGACGTGCCC GTCGAGTCGG TGCGCGGCCG CTACGGCGGG TACCGGCTCG CCGCCGGCTA CCGCCTGCCT CCGCTCATGC TGAACGACGA CGAGGCGCTC GCCGTGCTAC TGGGCCTGAT CGCCAGCCGC CGAGCGGGCC TGCTGACGAC GACCGGCACC GCAAGCGAGA CGGCGGCGGC CAAGATCCGG CGGGTACTGC CCGAACGGCT CGCGCGCGGG CTGGACGCCG TGCTCGACTC CCTCGCCTTC ACGGCCCCGC CTGGCGAGGC AACCGCCGCG GAAACCGCCG TCGTGCTCCC CATCGCCGAC GCGGTACGCC ATCATCGGCC GATCTCGATC AGGTATACCG CCGCCGACGG ACGGCGCAGC GAACGCACCC TGCATCCGTA CGGGCTCGTC GCCCACAACG GCCGGTGGTA TGTCACGGGT GCGGATCCCG GGATCGGCGA GGACCGGACC TTCCGGCTGG ATCGCATCGA GCACGCACGG ACCCTGCCGG GCTCATTCGA GCCGCCCGAC GGACTCGATC CGGCGCAGCG CGTCCTATCG GGACTCGCCA ATGCTCCGTA CCGGCATGAG GTGATTCTGC GGATCCAGGG AACTGTCGAA CAGATTCGCG CCCGGCTTCC CGCCAGCGTC GCGATCGTGG AAGAGCCTCC GTCCACGGGA GACACCGATC CCGGAACCGA GCGCTGGCTG CGGGTCGAGC TCCGAGCGGA ACGGCTCGAC TGGCTTCCCC CGGTGCTCGC GTCACTCGAC CGGCCCTTCG TCATCGAGCG ACCAGATGAC CTCCGCGGCC TCGTTCTGGC GCTCGCCGAC CGCCTCGCGA CCTCCGCCCA CACAGACCGC CTCGCACATG ACCGGAACCC ATGA
|
Protein sequence | MARPTAHVLT LLELLQSGGT RTVAELADRL GVDGRTVRRY VQHLIDLDVP VESVRGRYGG YRLAAGYRLP PLMLNDDEAL AVLLGLIASR RAGLLTTTGT ASETAAAKIR RVLPERLARG LDAVLDSLAF TAPPGEATAA ETAVVLPIAD AVRHHRPISI RYTAADGRRS ERTLHPYGLV AHNGRWYVTG ADPGIGEDRT FRLDRIEHAR TLPGSFEPPD GLDPAQRVLS GLANAPYRHE VILRIQGTVE QIRARLPASV AIVEEPPSTG DTDPGTERWL RVELRAERLD WLPPVLASLD RPFVIERPDD LRGLVLALAD RLATSAHTDR LAHDRNP
|
| |