Gene Franean1_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1864 
Symbol 
ID5670266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2240365 
End bp2240823 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content65% 
IMG OID641240785 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001506208 
Protein GI158313700 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0235857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCG ACGTCGGAGC CGTCGCCCCC GACTTCTCGT TGAAGGACCA GAACAACGAG 
GTCGTCACCC TGTCCGACTT CCGGGGCCGC CGCAACGTGG TGCTCCTGTT CTACCCGCTG
ACCTTCACCG GCGTCTGCCA GGGCGAGCTG TGCTCCGTCC GGGACGACCT GGCCTCCTTC
CAGAACGACG ACGTGCAGGT ACTGGCCATC TCCGTCGACT CCTCCTTCGC GCACAAGGTC
TGGGCCGACC AGCAGGGCTA CGAGTTCCCG CTGCTGGCCG ACTTCTGGCC GCACGGCGAG
GTGGCGAAGG CCTACGGGGT CTTCAACGAG GAGAAGGGCA TCTCCCTCCG CGGAACCTTC
ATCATCGACA AGGAGGGCAA GGTGCGCTGG AAGGTCGTCA ACAACATTCC GGACGCACGC
GACCAGGCCG AGTACCTCAA GGCCCTCGCC TCGCTGTAG
 
Protein sequence
MTVDVGAVAP DFSLKDQNNE VVTLSDFRGR RNVVLLFYPL TFTGVCQGEL CSVRDDLASF 
QNDDVQVLAI SVDSSFAHKV WADQQGYEFP LLADFWPHGE VAKAYGVFNE EKGISLRGTF
IIDKEGKVRW KVVNNIPDAR DQAEYLKALA SL