| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1859 |
|---|
| Symbol | |
|---|
| ID | 5670261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2232918 |
|---|
| End bp | 2233757 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641240780 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506203 |
|---|
| Protein GI | 158313695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00154434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTCC GGGCCCGCCG CATCGAGCGG CTGGAGGAGC ATCCGAACCT CCGCGGGATC
CTCGGCATCC TGGCGCAACT CGTGCACACC TCCGACAGCG AGCTGGTGGC ACTGGCCTCG
CTGTGGCGCA ACTCCGGTCA GCTCGCCTCG GCCCGGGACA AGGCGCTCGC CCCCGACTCC
CCGCTGATCG TCGAGGTCCT GGCGGCCTTC GACGCCCTCT CCGCCATCTA CGCGGATGAT
CTGGCCGGCG CGGAGTACGT CATGCTCGAC CCCGCGATCA CCGCGACCGC GCTGCGCGCG
ATGCGCGACG CGCTCGCCGG CGCCTACGCG AAGCCGATCC TGAACCGCTC CGAGTACACG
GCGCTGCTGC GGCCGTGGCG CACCGTGTAC CCGCGGGTCC GCTCGCACGA GCCGGATCTG
GGCCCGGCCG CCGCCGACGT GAAACGGGTC CTGGCCACAC TGCCGCGGCT GGCCCGCCGC
TGCCACGACC AGGCCAGCCT CGAGGTCTTC GACGGCCTGC TCACGACCGT GCTCACCCGC
GACGACGACG CCCACCAGAT CGCGATGGAG CGGGCCTTCG ACAGCGCCGT CCTGACCGGG
CGACGGAGGG TGTGGACGCT GGTCCGCCGC AGCGCCGCCG AGGGGTTCTG GCGGCTGTGC
CCGGCCTGCC GCCGGCTCGC CACGGCGCCG GACTCGTCCT CGGACGAGCG GGTCATGGAG
CTGTGCGCAG ACCTGGCCTG CGCGCTACTC GTCGAGGACC TGCTCGACCC CGAGGTCTTC
GCCCGGCTCA CCACCCCGCT GCGCGCGCTG GTGCCACTCC AGAGCCCTCC CGGGGACTGA
|
|---|
| Protein sequence | MILRARRIER LEEHPNLRGI LGILAQLVHT SDSELVALAS LWRNSGQLAS ARDKALAPDS
PLIVEVLAAF DALSAIYADD LAGAEYVMLD PAITATALRA MRDALAGAYA KPILNRSEYT
ALLRPWRTVY PRVRSHEPDL GPAAADVKRV LATLPRLARR CHDQASLEVF DGLLTTVLTR
DDDAHQIAME RAFDSAVLTG RRRVWTLVRR SAAEGFWRLC PACRRLATAP DSSSDERVME
LCADLACALL VEDLLDPEVF ARLTTPLRAL VPLQSPPGD
|
|---|
| |