| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1858 |
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| Symbol | |
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| ID | 5670260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2231264 |
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| End bp | 2232871 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240779 |
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| Product | phosphoesterase PA-phosphatase related |
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| Protein accession | YP_001506202 |
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| Protein GI | 158313694 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.832371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00202108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGGCGGA TTCCGCGGCC CGTTCACCGT TCCCGCACCC GTGACCGTGA CCGTTCCCGC
GACCTGGTCG GCGAGAGCGA TCTGCCCCGC GTCGGCGACC TGGCCCGCCT GCTCGTCCGG
CACGACGTCG CGATCGGCCG GCGTTTCGTG CACACCTTCA TCACGGTCGA CCGCGCGATG
TTCTCCGCCA TCGCCGGCGC CCGGCCGCTG GTGGACCCGC TGCTGCCCCG GCTCTCCCAC
GCGGCCGACC ACGGCATGCT CTGGTGGGGG GTGGCGGGCG CGCTGGGCGC GACGAAGGGC
CGCCGCCGCC CGGCGGCGAT GCGCGGCCTG CTCGCCCTGG GCGTCGCCAG CGCCGTCGCC
AACGGCCCGG CCAAGCTCCT GTTCCGCCGG GGCCGGCCGC CGACACACGG CATCCCGCCG
TTGCGCCGGC TGCGCCGTGA CCTGACGACC TTCTCGTTCC CGTCGGGGCA CTCGGCCTCG
GCGGCCGCCT TCGCCACCGG TGTCGCGCTC GACGCGCCCG CGGCGGCCGT CCCGGTGGTC
GCTCTGGCGT CCGCGGTCGC CTTCTCCCGG GTCTACGTCG GTGCCCACTA CCCGGGCGAC
GTGGTGGCCG GCGCCGCGCT CGGCATCGGC GCCGGGCTGC TGACGACGAA GGTGATGCCG
CGGCGCCCCT GGTCGCCGGC GCGGGCCCGG CCGGCGTCCG CCTGGGCCCC GGCCCTGCCG
GACGGGACGG GCCTGGGTGT GGTCGTCAAC GCCCGGTCCG GCGCCGGTCA CCACGCCGAG
CTCGCCGCCG TCCTGCGTGC CGACCTGCCC GGTGCGCAGG TCGTCGAGGT CGGCCCCGAC
CAGGACGTCG CCGAGGCCCT GGACCGCGTC GCCGCGCACA GCCGGGTCCT CGGCGTCGCC
GGCGGCGACG GGACGGTCAA CGCCGCGGCC GCGGCCGCTC TCGCCCGGGG CCTTCCGCTC
GCGGTGTTCC CGGCCGGCAC CCTCAACCAC TTCGCCGCCG ACGTCGGCCT GAACAGCGCC
GGTGACACGA TCAAGGCGGT CCGCGAAGGC ACGGCCGTCG CGGTGGACGT CGGCAGGGTC
GACGGCATCG GCGCGGCCGA CTCCCGGTTC AGCCGGATCT TCGTGAACAC CGCCAGCCTC
GGCGGCTACC CGGACATGGT CGGCATCCGG GAGCGTTTCG AGCGCCGGAT CGGCAAGTGG
CCGGCGATGA TCATCGCGCT GAGCCGGGTG CTGTGGAGCG ACCCGCCGTT CGACGTCGAG
ATCGACGGCG TCACCCGCCG GGTCTGGCTC GTCTTCGTCG GCAACGGCCG CTACCTGCCC
GACGGGTTCG CCCCGACATA CCGGACCCGC CTCGACGAGA GCCTGCTCGA CCTGCGGGTC
GTCGACGCGA CCGCGCCGCT GGCCCGGCTC CGCCTCGTCG GCGCGGTGCT GACCGGACGT
CTCGGCCGGT CACGGGTCTA CGAGCAGCGG ACGGTGGAAC GGGTGCGGAT CTCCTCCAGT
CAGCCGTCCC CGCTGCCGTT CGCCAGCGAC GGCGAGGTGA CCGAGGGGAT CCGCCGGATC
GCGGTCACGA CGAGCGGCGC CCGTCTCATC GTCTACCGGC CCGAGTAG
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| Protein sequence | MRRIPRPVHR SRTRDRDRSR DLVGESDLPR VGDLARLLVR HDVAIGRRFV HTFITVDRAM
FSAIAGARPL VDPLLPRLSH AADHGMLWWG VAGALGATKG RRRPAAMRGL LALGVASAVA
NGPAKLLFRR GRPPTHGIPP LRRLRRDLTT FSFPSGHSAS AAAFATGVAL DAPAAAVPVV
ALASAVAFSR VYVGAHYPGD VVAGAALGIG AGLLTTKVMP RRPWSPARAR PASAWAPALP
DGTGLGVVVN ARSGAGHHAE LAAVLRADLP GAQVVEVGPD QDVAEALDRV AAHSRVLGVA
GGDGTVNAAA AAALARGLPL AVFPAGTLNH FAADVGLNSA GDTIKAVREG TAVAVDVGRV
DGIGAADSRF SRIFVNTASL GGYPDMVGIR ERFERRIGKW PAMIIALSRV LWSDPPFDVE
IDGVTRRVWL VFVGNGRYLP DGFAPTYRTR LDESLLDLRV VDATAPLARL RLVGAVLTGR
LGRSRVYEQR TVERVRISSS QPSPLPFASD GEVTEGIRRI AVTTSGARLI VYRPE
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