| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1817 |
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| Symbol | |
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| ID | 5670219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2181112 |
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| End bp | 2182425 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240738 |
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| Product | hypothetical protein |
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| Protein accession | YP_001506161 |
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| Protein GI | 158313653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.114937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.122477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGA CGCTGCCCGT GGACGTGCGG GCCCAGGTCG TGGCCTACGC CGCCGAGACC
CTGGCCGACA TCGCCGAAGC GGTCGTCCCC CCGAGCCTGG TCGCCGTGCG CCGGTTCAAG
CCGTCGCGCC GGTCCCGGCT GGGCGCCGTC CCGCTGGCGG CCGCGATCGA GCACGACGCG
CAGTTCCGCG GCCGGGTGGC CGAATGGGTG CGCCGCACCC ACCCCGATCT GGTCGCCGCG
ATCACCGGGG AGGGCGGCCC GCCACCCGCC GCCCCACCCG CCCAGGTCGC GGCGGTCGCC
TACATCCTCC GGCTCCCCGA CTGGGAGCAG TTCGTCGAGG AGGCGGCCCG CTCGTCCGAG
CAGGCGGTCT CCACCGCGCG GCTCGTCGAC GCCGAGCGCG AGATCGACCG CCTGCACCAG
CAGATCGAAG CCGTCCGCCG GCTCGCCCGC ACCGAGCAGG ACCAGCTGCG CGGCCAGCTC
GACCAGGCAC GGGCCGAGGC GGAGGAGGCC CGCCGCCGGC TACGGTCCTC CGCGGACCGC
GTCCGCCGCG CCGAGCTCGC CGCCCGGGAG GTGAGCCTCG CCGCCGAGGC CGCCCGGGAC
GCCGCGCTGG CCTCGGCCCG GGAGAGCGAG GCCGAGGTAC GGCGGCTGCG CGCGCGGGTC
GGCGACCTCG AAGCCGCCGC CTCGCTGACC CGCCGCGACA CCCGCGAGTC CCGCGGCCTG
GACGAGGCGC GACTTCGGGT GCTGCTCGAC ACGCTGATGG CTGCGGCGAA CGGGGTCCGG
CGGGAGCTGG CGCTGCCGAC CACCGTCGCG CGGCCCGCCG ACCTGGTTGG CCGCTCCGAC
AACGGAGCTG CCTTCGACCC GTTCTCCGCG GTCGGTGGCC GCGGGCGCTC CGCCGACGAC
CCGGCCATCA TCGACGACGT CCTCGCCATC CCCGGCCTGC ATCTGATCAT CGACGGTTAC
AACGTCACCA AACGCGGCTA CGGCACCCTG ACCCTCCAGG CCCAGCGGGC ACGCCTGCTG
GCCGGCCTGG GAGCCCTGGC CGGCCGCTCC CTCGACACCG AGGTCACCGT CGTCTTCGAC
GCGACGGCGG TGGTGGCCCG GCCGGTCGGG GTCGCGATGC CCCGCGGCGT GCGGGTCGTC
TTCAGCCAGC CCGGCGAGCT GGCCGACGAC GAAATTGGAC GTCTCGTGCG TGCGGAACCC
GTCGGCCGAC CGGTGGCCGT CGTGACCTCC GACCGCGAGG TGGCGGAGAA CTGCGCCTCA
CAGGGCGCCC GCACAGTCTC CTCGGACGCC CTCCTGGCCC GCCTCGACCG CTAG
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| Protein sequence | MNETLPVDVR AQVVAYAAET LADIAEAVVP PSLVAVRRFK PSRRSRLGAV PLAAAIEHDA
QFRGRVAEWV RRTHPDLVAA ITGEGGPPPA APPAQVAAVA YILRLPDWEQ FVEEAARSSE
QAVSTARLVD AEREIDRLHQ QIEAVRRLAR TEQDQLRGQL DQARAEAEEA RRRLRSSADR
VRRAELAARE VSLAAEAARD AALASARESE AEVRRLRARV GDLEAAASLT RRDTRESRGL
DEARLRVLLD TLMAAANGVR RELALPTTVA RPADLVGRSD NGAAFDPFSA VGGRGRSADD
PAIIDDVLAI PGLHLIIDGY NVTKRGYGTL TLQAQRARLL AGLGALAGRS LDTEVTVVFD
ATAVVARPVG VAMPRGVRVV FSQPGELADD EIGRLVRAEP VGRPVAVVTS DREVAENCAS
QGARTVSSDA LLARLDR
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