Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1809 |
Symbol | |
ID | 5670211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2171580 |
End bp | 2172218 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641240730 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_001506153 |
Protein GI | 158313645 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0920236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCG TGGCCTCAGC CCCTGTCCTC GAGAAGGCTC CTCCAGCGCA CCCGGCGGCC AACCGTCCCT CGATGGTCTC GGTCGGCACA GTGGTGTGGC TGTCGTCGGA GCTGATGTTC TTCGCGGCCC TGTTCGCGAT GTACTACACG ATCCGCTCGG TCAACAGCGG CAACTGGCCG CCGGTCACCG GCGACCCGGC CGGGTCCGAG ATCGGGCCCG TGCACCTGCA CGTCGCCTAT GCGCTGTTCT TCACGGTGAT CCTGGTCCTA TCCAGTGTGA CCTGCCAGCT CGGGGTCTTC GCCGCCGAGC GCGGCGACGT CATCGGCCTG CGCCGCTGGT ACCTGATCTC GCTGCTGATG GGGATCGTCT TCGTCGGCGG CCAGGCCTGG GAGTACTTCA AGGAGAACGA GTTCACCCTG GCGTCGCACG GCTACGGGTC GGTGTACTAC CTGACCACCG GCTTCCACGG GTTGCATGTG ATCGGTGGGC TGGTCGCCTT CGTTCTGGTG CTGGCCAGGT CGACCTACGG GCGGTTCACG CCTGAGAAGG CGACGTCAGC GATCGTCGTG TCGTACTACT GGCACTTCGT CGACGTCGTC TGGATCGCCC TGTTCGCCAC CATCTACCTC CTCCAGTGA
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Protein sequence | MTVVASAPVL EKAPPAHPAA NRPSMVSVGT VVWLSSELMF FAALFAMYYT IRSVNSGNWP PVTGDPAGSE IGPVHLHVAY ALFFTVILVL SSVTCQLGVF AAERGDVIGL RRWYLISLLM GIVFVGGQAW EYFKENEFTL ASHGYGSVYY LTTGFHGLHV IGGLVAFVLV LARSTYGRFT PEKATSAIVV SYYWHFVDVV WIALFATIYL LQ
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