Gene Franean1_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1809 
Symbol 
ID5670211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2171580 
End bp2172218 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID641240730 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001506153 
Protein GI158313645 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0920236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG TGGCCTCAGC CCCTGTCCTC GAGAAGGCTC CTCCAGCGCA CCCGGCGGCC 
AACCGTCCCT CGATGGTCTC GGTCGGCACA GTGGTGTGGC TGTCGTCGGA GCTGATGTTC
TTCGCGGCCC TGTTCGCGAT GTACTACACG ATCCGCTCGG TCAACAGCGG CAACTGGCCG
CCGGTCACCG GCGACCCGGC CGGGTCCGAG ATCGGGCCCG TGCACCTGCA CGTCGCCTAT
GCGCTGTTCT TCACGGTGAT CCTGGTCCTA TCCAGTGTGA CCTGCCAGCT CGGGGTCTTC
GCCGCCGAGC GCGGCGACGT CATCGGCCTG CGCCGCTGGT ACCTGATCTC GCTGCTGATG
GGGATCGTCT TCGTCGGCGG CCAGGCCTGG GAGTACTTCA AGGAGAACGA GTTCACCCTG
GCGTCGCACG GCTACGGGTC GGTGTACTAC CTGACCACCG GCTTCCACGG GTTGCATGTG
ATCGGTGGGC TGGTCGCCTT CGTTCTGGTG CTGGCCAGGT CGACCTACGG GCGGTTCACG
CCTGAGAAGG CGACGTCAGC GATCGTCGTG TCGTACTACT GGCACTTCGT CGACGTCGTC
TGGATCGCCC TGTTCGCCAC CATCTACCTC CTCCAGTGA
 
Protein sequence
MTVVASAPVL EKAPPAHPAA NRPSMVSVGT VVWLSSELMF FAALFAMYYT IRSVNSGNWP 
PVTGDPAGSE IGPVHLHVAY ALFFTVILVL SSVTCQLGVF AAERGDVIGL RRWYLISLLM
GIVFVGGQAW EYFKENEFTL ASHGYGSVYY LTTGFHGLHV IGGLVAFVLV LARSTYGRFT
PEKATSAIVV SYYWHFVDVV WIALFATIYL LQ