| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1802 |
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| Symbol | |
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| ID | 5670204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2164670 |
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| End bp | 2166376 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641240723 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001506146 |
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| Protein GI | 158313638 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.115752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTTC TGCACGAGTC GCCCGCCGGG CCGGCCGGGC ACGCCCATGA GCCGGTGAAC
CACGAGAAGC CGGCGATCGC GAACCTGCTC GGATACCTGA GGACGACGTC CCACAAGGAC
ATCGCGATCA TGTACTTCCT GACGTCATTC GCGTTCTTCG TCATCGCCGG CATCCTCGCG
ATCTTCATCC GTGGCGAGCT GGCCCGCCCG GGGCTGCAGT ACTTCTCCAA CGACCAGTAC
AACCAGTTCT TCACCATGCA CGGCACGCTG ATGCTGCTGA TGTTCGCGAC GCCGCTGGCG
TTCGCGTTCG CCAACTACCT CGTGCCGCTG CAGATCGGCT CGCCGGACGT CGCGTTCCCG
CGGCTGAACG CGCTGTCGTA CTGGCTGTTC CTGTTCGGCA GCCTCACCGT GTTCGCCGGG
TTCCTGAGCC CGGGGGGTGC GGCCTCGTTC GGCTGGTTCG CCTACGCGCC GCTGAGCAAC
CAGCTCTACT CGCCCGGGGT CGGTTCCGAC CTGTGGGTGC TCGGCCTGAC GGTGCAGGGG
CTCGGCACGA TCCTCGGTGC CGTCAACTTC ATCACCACGA TCCTGTGCCT GCGCGCCCCC
GGCATGACGA TGTTCCGGAT GCCGATCTTC TGCTGGAACC TGCTGGTCAC CTCGATCCTG
GTGCTGGTGG CGTTCCCGGT GCTGGCCGCC GCCCTGCTCG CGCTCGCGGC GGACCGAAGG
TTCGGGGCCC ACATCTTCGA CGCCGAGAAC GGCGGCGCGA TGCTGTGGCA GCACCTGTTC
TGGTTCTTCG GGCATCCCGA GGTCTACATC ATCGCGCTGC CGTTCTTCGG GATCGTCACC
GAGATCATCC CGGTGTTCTC CCGCAAGCCG CTGTTCGGCT ACAAGGGCCT GGTGTTCGCC
ACCATCAGCA TCGGGGCCCT GTCCGTCGCG GTGTGGGCGC ACCACATGTT CGTCACCGGC
GCGGTGCTGC TGCCCTTCTT CGCCTTCCTG TCGTTCCTGA TCGCGGTGCC CACCGGCATC
AAGTTCTTCA ACTGGATCGG CACGATGTGG CGCGGGCAGA TCAGCTTCGA GGCGCCGATG
CTGTTCGCGG TCGGCTTCCT GGTGACGTTC CTGTTCGGTG GTCTCACCGG TGTGCTGCTG
GCCAGCCCGC CGATCGACTT CCATGTCAGT GACAGCTACT TCGTGGTCGG ACACTTCCAC
TACGTCGTCG CCGGCCTCAT GTTCGCGGCC TTCGCGGGTG TCTACTTCTG GTTCCCGAAG
GTCACGGGCC GGATGCTGAA CGAGAAGCTG GCGAAGCTGC ACTTCTGGAC GCTGTTCCTG
GGCTTCAACG CCACCTTCCT GGTGTTCCAC TGGCTGGGCA CCCAGGGCAT GCCCCGGCGG
TTCGCGGACT ACGGCCCGAA CGACGGCTTC ACCACCCTGA ACACGGTCGC GACGGCGGGC
TCGTTCCTGA TGGGCCTGTC CACGCTGCCG CTGCTGTACA ACCTGTGGTA CTCGTACCGC
AAGGGCCCGA TCGCCGCGGT CGACGACCCG TGGGGCTACT CCAACTCGCT GGAGTGGGCG
ACGTCCTGCC CGCCGCCCCG GCACAACTTC CGGTCGCTGC CGCGCATCCG CTCCGAGCGA
CCCGCGTTTG ACCTGCACTA CCCGGCGGTC GTCGGTAGGG CGGATTACCA CGCCACACCG
GAACTCGGTC AGGGAGCCGC GCGATGA
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| Protein sequence | MTLLHESPAG PAGHAHEPVN HEKPAIANLL GYLRTTSHKD IAIMYFLTSF AFFVIAGILA
IFIRGELARP GLQYFSNDQY NQFFTMHGTL MLLMFATPLA FAFANYLVPL QIGSPDVAFP
RLNALSYWLF LFGSLTVFAG FLSPGGAASF GWFAYAPLSN QLYSPGVGSD LWVLGLTVQG
LGTILGAVNF ITTILCLRAP GMTMFRMPIF CWNLLVTSIL VLVAFPVLAA ALLALAADRR
FGAHIFDAEN GGAMLWQHLF WFFGHPEVYI IALPFFGIVT EIIPVFSRKP LFGYKGLVFA
TISIGALSVA VWAHHMFVTG AVLLPFFAFL SFLIAVPTGI KFFNWIGTMW RGQISFEAPM
LFAVGFLVTF LFGGLTGVLL ASPPIDFHVS DSYFVVGHFH YVVAGLMFAA FAGVYFWFPK
VTGRMLNEKL AKLHFWTLFL GFNATFLVFH WLGTQGMPRR FADYGPNDGF TTLNTVATAG
SFLMGLSTLP LLYNLWYSYR KGPIAAVDDP WGYSNSLEWA TSCPPPRHNF RSLPRIRSER
PAFDLHYPAV VGRADYHATP ELGQGAAR
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