Gene Franean1_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1797 
Symbol 
ID5670199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2160303 
End bp2160665 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content66% 
IMG OID641240718 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_001506141 
Protein GI158313633 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.654159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.486703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC AGGACACAAC CGAGACCGAG ACCAGGCCGA GCAGCGTCGT TCTCACCGAC 
ACGGCCGCCG GCAAGGTGAA GACCCTGCTC GAGCAGGAGG GGAGGGATGA CCTCCAGCTC
CGGATCGCCG TGCAGCCCGG CGGCTGCTCT GGCATGCGCT ACCAGCTCTT CTTCGACGAG
CGCCAACTCG ACGGCGACAC GGTGCTCGAC TTCTCGGGGG TCAAGGTGGC CGTTGACCGG
ATGAGCTACC CCTACCTCGG CGGCGCGACG ATCGACTTCG TCGACACGAT CGAGAAGCAG
GGCTTCACGA TCGACAACCC GAACGCGCAG GGCTCCTGCG CGTGTGGCGA CTCCTTCCAC
TGA
 
Protein sequence
MTVQDTTETE TRPSSVVLTD TAAGKVKTLL EQEGRDDLQL RIAVQPGGCS GMRYQLFFDE 
RQLDGDTVLD FSGVKVAVDR MSYPYLGGAT IDFVDTIEKQ GFTIDNPNAQ GSCACGDSFH