Gene Franean1_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1794 
Symbol 
ID5670196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2157019 
End bp2157993 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content71% 
IMG OID641240715 
Productaldo/keto reductase 
Protein accessionYP_001506138 
Protein GI158313630 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.81315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCATC GACGCCTCGG GCGGAGTGGA CTGTCCGTCA GCGAGATCTC CTACGGCAAC 
TGGATCACCC ACGGTGACCA GATCGAGGCC GATACGGCGA AGGCCTGCGT GCACGCTGCG
CTCGACGAGG GAATCACCAC GTTCGACACG GCCGACGTGT ACGCCCAGAC CCGCGCCGAG
TCGGTTCTCG GCGAGGCCCT GGCCGGGGTC CGCCGGGAGT CCTACGAGCT GTTCACCAAG
GTCTTCTGGC CGACCGGCCC CGGCGAGAAC GACAAGGGCC TGGGGCGCAA GCACATCATC
GAGTCCGCGC ACAACTCGCT GCGCCGGCTC GGCACCGACC ACATCGACCT CTACCAGGCC
CACCGCTACG ACCCGACGGT CCCGCTAGAG GAGACGCTGC GCGCCTTCGA CGACCTGGTG
CGCGCCGGCA AGGTCCTCTA CGTCGGCGTC TCGGAGTGGA CGGCGGCGCA GATCGCCGAC
GCCGCGCGGA TCGCCGCCGA GCTCGGCCTG GACAGGATCA TCTCCAACCA GCCGCAGTAC
TCGATGCTGT GGCGCACCAT CGAGGCCGAG GTGGTGCCGA CCTCCCGCAC GCTGGGCATC
TCCCAGATCG TCTGGTCGCC GATCGCCCAG GGCGTGCTGA CCGGCAAGTA CCTGCCCGGG
CAGCCGCCGC CCACCGGCAG CCGGGCGACC GGCGCGACCG GCGCGGGCTT CATCGCCCGT
TTCATGTCCG ACGAGGTCCT GACGGCCGTG CAGCACCTGC GCCCGATCGC CACGGAGGCC
GGCCTGACAA TGGCGCAGCT CGCCATCGCC TGGGTCCTGC AGAACGACAA CGTGGCGTCC
GCGATCGTCG GCGCCTCCCG GCCCGAGCAG GTCAAGGACA ACGTCGGGGC GGCCGGCGTC
GTCCTGGAGC CGGCGCTGCT CGCCCGCATC GACAAGGTGC TCGCCGGCGT GGCGACCACC
GAGCCGGAGG CCTGA
 
Protein sequence
MKHRRLGRSG LSVSEISYGN WITHGDQIEA DTAKACVHAA LDEGITTFDT ADVYAQTRAE 
SVLGEALAGV RRESYELFTK VFWPTGPGEN DKGLGRKHII ESAHNSLRRL GTDHIDLYQA
HRYDPTVPLE ETLRAFDDLV RAGKVLYVGV SEWTAAQIAD AARIAAELGL DRIISNQPQY
SMLWRTIEAE VVPTSRTLGI SQIVWSPIAQ GVLTGKYLPG QPPPTGSRAT GATGAGFIAR
FMSDEVLTAV QHLRPIATEA GLTMAQLAIA WVLQNDNVAS AIVGASRPEQ VKDNVGAAGV
VLEPALLARI DKVLAGVATT EPEA