Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1786 |
Symbol | |
ID | 5670188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2146808 |
End bp | 2151091 |
Gene Length | 4284 bp |
Protein Length | 1427 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641240707 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_001506130 |
Protein GI | 158313622 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.441157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGGATG TGTCTGTGCA GGAGCGGCTG CCGTCCGAAC CGCCCGGCAG CCTCGCTGTG CCCGCCGCGC CGGACGTGGT GGCGGGGGGT CCGGTCGAGC TGCGGGGCGA GCCCGGGATG TGGCCCGCGG GGGTGGTCGC CCCGTGGGCG GGAGATCCGC GCGGCCCGGA CCGCCGCCGG GTGATCTTCC TCAGCCACAC CGCCGAGCTG CGGCGTTTCC CGCGGGACCG GTCGTTCGTG GCCGCCGCCG AGCGCGCCGT CGCGCTGGCC GGTGACCGCG TCGTCGACAT GGAGTACTTC GGCGCGCGCG CCGACAACCC GGCCGAGTTC TGCGTCCGGC AGGTCCAGGA GAGCGACGTC TACATCGGTC TCATCGGGTT CCGCTACGGG TCGCCCGTCC GGGAGCTGCC GCACCTTTCC TACACCGAGC TCGAGTTCCA GGCGGCCACC GAGGCGGGCA TGCCCCGCCT GGTGTTCCTC CTCGAGGACG ACGCGGAGGT CCCCTTCCGC GAGTTCGTCG ACCCCGCCTA CGGCGAGCGG CAGGAGGCCT TCCGGGCGCG GCTGCGGGAC GGCGGCACCA TCGTCGCCGG GTTCCGGGAC GGCCGGCTGG AGACCGCCGT GCTCGACGCC CTGGTCAAGC TGCGGGACAG CGAGCGGCGG GCGACCCGCA CGCTGCCCGG GTTCGGCGAC GTCCCCCCGG GCCCCCCGGG CCCGCGGCCC GTCCTCGTCC CGGGTCTGGG CCCTGGCGGT GGATGGCTGC GCCGCCCCTG GATGGTGCCG GCCGTCCGGG GGCTGGTGGA GCGCCCGGAG CTCACCGAGG CTGTGCTGCG CCGGCTGCTG CCGCCCGCGA GCGCCCCGGA CGCCCCGGAC GCCCCGGCCC CCTCGGACCC CCCGATCGGC GCCGAGGTCG TCCCGCGCCC CGTCGTGCTC GCGGGCGCCG GCGGCTTCGG GAAGACGACG CTGGCCGCGG CCGTGTGCGG CAGCACGCGG ATCGCCCGCC GGTTCGGCGG CGGGGTGCTG TGGGTGACCC TCGGCGAGTC GCTGGCCGGG GCGCACCTGG CCGACCGGAT CAACGACCTG AGCGAGGCGC TGTCCGGGGT CCGCCCGACG CTGTCGGACC CCGAGCAGGC CGGGTTCCGC CTCGGTGAGC TGCTCGGCGC CGAGCCTCGG CTGCTCGTCC TGGACGACGT GTGGCGGCGC GCCCAGCTGC GCCCGTTCCT GCAGGGCGGG CCGGGCTGCG TCCGCCTGAT CACCACACGG ATGCGCGGCC TGCCGCCGGA CGCCGACGTC GTCCAGGTGC CCGCGATGGC CGACGGCGAG GCGGTCAGCC TGCTGACCAG GGATGTCCCC GCGCCGCTGC CCGACGCCGT CCTGCGCCGG CTGCTGGTGG TCACCGGCCG CTGGCCGGTG CTGCTCGCGC TGGTCAACCG GGCGGTCGTC CGCCAGACTC GGGACGGCAT GTCGGTGCCC CGCGCGGCCG AGCGGGTGCT GCGCCGGCTG GAGCGGCGCG GCCCGACCGC ACTGGACGTC AGCCGGGTCG AGGAACGGAC GCTCGCCGTC GAGGCGACGC TGTCGGCGAG CCTGGGCCTG CTCACCGGCG ACCGGCTCGA CCAGTATCTC GAGCTGGCCG TCTTCGGCGA GGACGTGGAG ATCCCGCGGG ACGTCCTGGA GGCCTACTGG GCGGCGACCG GCGATCTCGA CCCCGACGAG GTCGACGACC TGTGCCAGGA GTTCGCCGAC CTTTCCCTCG TTGTGGCCTA CCGGCGGGAC CCGCCGTCGC TGGTGCTGCA GGACGTCCTG CGGACCTACC TGCGGGCCCG GGTCGGGGCG GAGCGCCTGC GCGAGCTGGA CGGCGTCCTG TGCGACGCGC TCGCCGGCAT GATCACCGGC GGCGCTGGCG GTGCTGACGA CCCGGCCGGT GCTGACGCCC CGGCCGGCCG GGGCGGCCGC GGCGGCCCGG CCGGCTCCGA GCCGGCCGGC GGGTCCGAGC CGGCCGGCGG GGTGCGTGCC CCGTGGTGGA CGGCGCCGGA GCGGGCCGGC TACCTCTGGG AGCATCTCGC CCGGCACCTG GCCGGCGCCG GCCGGCACGA CGAGCTCGCC GTGCTGCTCG GGGACCTGCG CTGGACGGTC GGGAAGCTCT CCGTCGCCCG GCTCGGGCCG GTGGCGGTCG AGGCCGACCT GGCCGTCGCC GGCAGGGTGC GGCCGGACGA CCCGGTGCTG CCCGCGCTGA GCCGGGCGCT CGGGCAGAAC GCGCACCTGC TCGGCCCCAC CGAGCCCGCA GAGGCGCTGG GCACGACCCT GCTGAGCCGG CTCGACGGCA TCCGCGCGCT CGAACCGGCC CGCGCCGCGT TGGCCCGGCG GCTGAGCGGG CCACGGCTGG TCAACCGGTG GACGCTGCCC GACCAGCCGC ACCCCGCGCT GCGCCGGGTG CTGGCCGGCC ACCACCGCCA GGTCCTCGCG CTGGCCGTCG CCCCGGACGG GTCGTGGCTG GCCTCCGCCG GCATGGACGG CACCGTCCGC ACCTGGACGG TCGGCGCGGG CACGGCGCGC TCGGTGCTCA CCGGCCACAT CGGCCAGGTG CTCGGCGTCG CGGCCGCGCC CGGCAGCGGC TGGCTCGTCT CGGCCGGCGA GGACGGCACC GCCCGGATCT GGGACGTCCC CGGCGACGAT GTCCGTGGTG ACGATGTCCG TGGTGACGAT GTCCGCGGCG ACCTGGACGA CCCCGAGCCG GGTGATCCCG GCGACACCGG GGAGCGGCGG GGCCGGGATC CCGAGGGGGT CGACCCGGTG GCGCGGCTTG TCCTGCGCGG GCACGACGGC CCGGTGAACG GCTGCGCGGT GACGGCCGAC GGCACCGGTG TGATCACCGT CGGCGACGAC GGCTCGTTGC GGACCTGGGA CGCCACCACC GGCACGCCGA GGCTCGCGGT ACCGGTCACC GGCGGGCGGC TGCGCTGCTG CGCCACCGGG CCAGGCGGAG CCGTCGTCGC GACCGGCGGC GAGGACGGGA CCATCCGGCT GCACGACCCG CTGACCGGCG AGATCCTCCG GCGGCTGGCC GGTCACGCCG GTCCGGTGCT TGCGCTGGCG TTCGGCCCGG ACGGCTCCTG GCTGGTCTCG GCGGGCGAGG ACGGCACGCT GCGTCGCTGG GACACCGCCG CCGGCCGCCA GACCGGGGTG CTCAGCGACG GCAGCCGCCC CGTACGGGCC TGCGCGGTCG CCCCGGACGG CTCCTACCTG GTGGCGCCGG CCGGGGACGC GATCTCCGTC CGGGATCTCC CCACCGGCGG CCAGCGGGCC GAGCTCACCG GGGCCACCGG GACGCGGGCC TGCGTCGTCG CCCCGGACGG CTCCTGGATC GCCTCCGCCG GGCGCTACGG CACGATCCGG GTCTGGAGCA CCGGCAGCGA CCTGCCGCGC CCGTCGACCG CGGGGCGCAA CGAGGGGGCC CGCGGCTGCG CCGTCGTGGC CGGCGGCCTG GTGGTCTCCT CCAGCGACGA CGGCACCGTC ACGGCCTGGG ACCCGGTCAC CGGCGAGCCG GGCGCGGCGA TGGCGGGCCT GCCCGGCCCG GCCCGCGGCT GCCGGGCCGG CCCCGGCGGG CGCTGGGTCG TGGTGTCGGC GCAGCCGACC GCGCTGCGGC TGTGGGAGCC CGCCACCGGC GTCGTCCGCG CCGTGCTGAC CGCCGACGTG GCGATCCTCG GCTTCACCGT CTCCGCGGAC GGCTCCTGGG TGGCCGGCGG CTGCGAGGAC GGCTCGGTGC GGCTGTGGGA CACCGAGTCC GGGGAGTGGA TGGCCACCTT CGCCGGCCAC ACCGAGGGGG TGCAGGCCTG CGTCGCCGGT CCGGACGGCA CCTGGCTCGC CTCCGGCGGG GACGACGCCA CCGTGCGGAT CTGGGACGTG GCGACCCTCG AGCAGCGCGC CTCGCTGCCC GGCCACACCG ACCCGGTGCT CGGGCTGACC ACCGACCCGG CGGGCCGCGT CCTGGTCTCG ACCGGCGCGG ACCACACCGT GCGGGTCTGG GAAGTCGCGA CCGGGCGGGC GCTGGCTGTC CTGCACGGTC ATGCGCACAC GGTGCGGGAG GCGAGCTTCT CCCCGGACGG CGCCTGGCTC GCGACGGTCG GCGGGGACGG GTCGGTGCGG GTCTGGGACC CGCTGATCTG GCAGTGCCGC ACGATGATCC GGTTCGAAGG CGCGGCCCGC GGCTGCTGCT GGCTGCCGGA CTCCACGGGC CTGGCCGTCG CCGGCTCGGC CGGCCTGTAC CTCTACAGCT TCGTGCCGGA CTGA
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Protein sequence | MPDVSVQERL PSEPPGSLAV PAAPDVVAGG PVELRGEPGM WPAGVVAPWA GDPRGPDRRR VIFLSHTAEL RRFPRDRSFV AAAERAVALA GDRVVDMEYF GARADNPAEF CVRQVQESDV YIGLIGFRYG SPVRELPHLS YTELEFQAAT EAGMPRLVFL LEDDAEVPFR EFVDPAYGER QEAFRARLRD GGTIVAGFRD GRLETAVLDA LVKLRDSERR ATRTLPGFGD VPPGPPGPRP VLVPGLGPGG GWLRRPWMVP AVRGLVERPE LTEAVLRRLL PPASAPDAPD APAPSDPPIG AEVVPRPVVL AGAGGFGKTT LAAAVCGSTR IARRFGGGVL WVTLGESLAG AHLADRINDL SEALSGVRPT LSDPEQAGFR LGELLGAEPR LLVLDDVWRR AQLRPFLQGG PGCVRLITTR MRGLPPDADV VQVPAMADGE AVSLLTRDVP APLPDAVLRR LLVVTGRWPV LLALVNRAVV RQTRDGMSVP RAAERVLRRL ERRGPTALDV SRVEERTLAV EATLSASLGL LTGDRLDQYL ELAVFGEDVE IPRDVLEAYW AATGDLDPDE VDDLCQEFAD LSLVVAYRRD PPSLVLQDVL RTYLRARVGA ERLRELDGVL CDALAGMITG GAGGADDPAG ADAPAGRGGR GGPAGSEPAG GSEPAGGVRA PWWTAPERAG YLWEHLARHL AGAGRHDELA VLLGDLRWTV GKLSVARLGP VAVEADLAVA GRVRPDDPVL PALSRALGQN AHLLGPTEPA EALGTTLLSR LDGIRALEPA RAALARRLSG PRLVNRWTLP DQPHPALRRV LAGHHRQVLA LAVAPDGSWL ASAGMDGTVR TWTVGAGTAR SVLTGHIGQV LGVAAAPGSG WLVSAGEDGT ARIWDVPGDD VRGDDVRGDD VRGDLDDPEP GDPGDTGERR GRDPEGVDPV ARLVLRGHDG PVNGCAVTAD GTGVITVGDD GSLRTWDATT GTPRLAVPVT GGRLRCCATG PGGAVVATGG EDGTIRLHDP LTGEILRRLA GHAGPVLALA FGPDGSWLVS AGEDGTLRRW DTAAGRQTGV LSDGSRPVRA CAVAPDGSYL VAPAGDAISV RDLPTGGQRA ELTGATGTRA CVVAPDGSWI ASAGRYGTIR VWSTGSDLPR PSTAGRNEGA RGCAVVAGGL VVSSSDDGTV TAWDPVTGEP GAAMAGLPGP ARGCRAGPGG RWVVVSAQPT ALRLWEPATG VVRAVLTADV AILGFTVSAD GSWVAGGCED GSVRLWDTES GEWMATFAGH TEGVQACVAG PDGTWLASGG DDATVRIWDV ATLEQRASLP GHTDPVLGLT TDPAGRVLVS TGADHTVRVW EVATGRALAV LHGHAHTVRE ASFSPDGAWL ATVGGDGSVR VWDPLIWQCR TMIRFEGAAR GCCWLPDSTG LAVAGSAGLY LYSFVPD
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