| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1785 |
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| Symbol | cobT |
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| ID | 5670187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2145461 |
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| End bp | 2146684 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641240706 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001506129 |
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| Protein GI | 158313621 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0813034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.475687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATCA CCCCGGCCGC CGAACCCGCC GCCGCGCCCG CGCTCGCGCC GGACGCCGTA
CCGGTCGTCC CCGACCTCGA CCACGAGGCC ATGACGGCCG CGCGCCACCG GCAGGGCCTG
CTCACCAAAC CGCCGGGCGC CCTGGGCCGC CTCGAGGACC TGTCGGTCTG GATCGCCGGC
GCGCAGGGCA CCTGCCCGCC GCGGCCGTTG CGCCGGGTCC GGGTGGTGGT CATCGCCGGG
GACCACGGCA TCGCCACGGC CGGCGTGTCC GCGTTCCCGT CCGAGGTGAC CGCGCAGATG
GTCGCGAACT TCGCCGCCGG CGGCGCGGCC GTCAACGTGC TGGCCCGCCA GGTCGGCGCG
TCGGTGCGGG TGGTGGACGT CGCCGTCGAC ACCCCCGTGC CCACCACGGC GGGCGGGGCG
GACGGCAGCG CGCCTCCCGA GCGGTACCGG GTCCGGCGCG GGAGCGGGCG GATCGACCGG
ACCGACGCAC TCACCGCCGC CGAGGTCGAC GCCGCCTTCG CCGTCGGCCG GCTGATCGCC
GACGAGGAGA TCGACGCCGG CGCCGACCTG CTCGTCCCCG GCGAGATGGG CATCGGCAAC
ACCACGCCCG CCGCCGCCGT GGTGGGCACG CTGCTCGACC GCGAGCCGAT CGAGGTCGTC
GGCCGCGGCA CCGGCATCGA CGACGAGCGC TGGATGCTCA AGACGGCCGC GATCCGGGAC
GCGATGCGCC GCGCCCGGCC GTACGCCGGC AACGCGCGCT CTGTTCTGCG GGTCGCCGGT
GGGGCGGATC TCGCCGCGCT CGCCGGCCTC CTCGTCCAGG CCGGGGTGCG GCGCACGCCC
GTCGTGCTCG ACGGCGTGAT CGTCTGCGCG GCGGCGCTGG CCGCCGAGAT GATCGCGCCC
GGGGCGAAGC GGTGGTGGGT GGCGGGGACC CGTTCCACCG AGCCGGCGCA GCGCCTCGTC
CTCGACCACC TCGGGCTGGA GCCGCTCCTG GACGCCGGCC TGCGGCTCGG GGAGGGCACC
GGCGCGCTGC TGGCCGTCCC GATGCTGACG GCCGCGCAGG CCACGCTGGC CGAGATGGCG
ACGTTCGACC AGGCCGGGGT GAGCGCCAAA GAGCCGGCCG CGCCCGACAC CGACACCGAC
GAGCCGGGCG GCACCGGATC TGCCGAGAGC GGACCTGCCG GTGCCGGGCC ACGCGATGAC
GGCACCGCCG CCGGCGCGCC GTGA
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| Protein sequence | MDITPAAEPA AAPALAPDAV PVVPDLDHEA MTAARHRQGL LTKPPGALGR LEDLSVWIAG
AQGTCPPRPL RRVRVVVIAG DHGIATAGVS AFPSEVTAQM VANFAAGGAA VNVLARQVGA
SVRVVDVAVD TPVPTTAGGA DGSAPPERYR VRRGSGRIDR TDALTAAEVD AAFAVGRLIA
DEEIDAGADL LVPGEMGIGN TTPAAAVVGT LLDREPIEVV GRGTGIDDER WMLKTAAIRD
AMRRARPYAG NARSVLRVAG GADLAALAGL LVQAGVRRTP VVLDGVIVCA AALAAEMIAP
GAKRWWVAGT RSTEPAQRLV LDHLGLEPLL DAGLRLGEGT GALLAVPMLT AAQATLAEMA
TFDQAGVSAK EPAAPDTDTD EPGGTGSAES GPAGAGPRDD GTAAGAP
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