| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1780 |
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| Symbol | |
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| ID | 5670182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2138605 |
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| End bp | 2139987 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240701 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001506124 |
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| Protein GI | 158313616 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00606157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.191358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGACA CAGCGGCCGG TCCCGTCGAC CTGGTCGTCC TCGGGGGTGG CAGCGGCGGT
TACGCCGCGG CGCTGCGCGC CGCCGAGCTC GGCCTGCGGG TCGTCCTGGT GGAGAAGGAC
AAGCTCGGCG GCACCTGCCT GCACCGCGGC TGCATCCCGA CGAAGGCGCT GCTGCACGCG
GCGGAGGTCG TCGACACCGT CGCCGCCAGC GAGAGCTTCG GCATCCGGGC CACCCTGGAC
GGCATCGACA TGGCCGGGGT CCGCGCCTAC CGCGACTCGG TGGTCGACGG CCTGTACAAG
GGCCTGAGCG GACTGGTCCG GGCCCGGGGC ATCGAGGTCG TCACGGGCAC CGGCCGGCTG
GTGTCCCCGA CCGCGGTGGC CGTCGGCGAC CGGGTGGTCG AGGCCCGGCA CGTGCTGCTC
GCCACCGGCT CGGCCGCGCG AACGCTACCC GGCCTCGACC TCGACCACCG GACGGTCATC
GACAGCGGGG ACGCGCTGGC GCTGGAGCAC GTCCCGGGGT CGGTGGTGGT GCTCGGCGGC
GGGGCGATCG GCTGCGAGTT CGCGTCGGTC TGGCGTTCGT TCGGCGCCGA GGTGACCATT
GTCGAGGCGC TGGGCCATCT CGTCCCGGCC GAGGACGAGG CCAGCTCGAA GCTGCTCGAA
CGCGCGTTCC GCGCCCGGGG CATCGCCCTG CGCCTCGGGG TGCCCCTCGC GGGCGCGAAG
ACCACCGACC GGGGCGTGAC CGTCGTCCTG GAGGACGGGT CCACCGTCGA CGCCGAGCTC
CTGCTCGTCG CGGTCGGGCG CGGCCCGGTT TCCGCCGGCC TCGGTCTGGA CGAGGTCGGC
GTCTCGACGG ACCGCGGCCA TGTCCTCGTC GACACGCACC TGCGGACGAA CATCCCCACG
GTCTCGGCCC TCGGGGACGT CCGGCCCGGG CCACAACTGG CCCACGTCGC GTTCGCCGAG
GGCATCCTCT CGGCCGAGCT GCTCGCCGGG CTCGACCCGG TACCGGTCGA CTACGACAAC
GTCCCGCGGG TCACCTACTC CCATCCCGAG GTGGCGTCCG TGGGTCTGAC CGCGGCCGCC
GCCCGGGAAC GCCACGGGGA GATCAACACC GCCACGTACC ACCTGGCGGG CAACGGAAAG
GCACGGATCC TGCGCTCCGC GGGCGCGGTG ACCGTGGTCT CGGCTGCGGA CGGCCCGGTC
GTCGGCGTCC ACATGGTGGG CGACCGGGTC GGCGAGCTCA TCGCCGAGGC CCAGCTCATC
ACCAACTGGG AGGCATACCC CGCCGACGTG GCCCAGCTCC TCCATCCGCA CCCGACCCTC
TCCGAGGCGC TCGGCGAGGC GCACCTCGCT CTCGCCGGCA AGCCACTGCA CGTCCACAGC
TAG
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| Protein sequence | MADTAAGPVD LVVLGGGSGG YAAALRAAEL GLRVVLVEKD KLGGTCLHRG CIPTKALLHA
AEVVDTVAAS ESFGIRATLD GIDMAGVRAY RDSVVDGLYK GLSGLVRARG IEVVTGTGRL
VSPTAVAVGD RVVEARHVLL ATGSAARTLP GLDLDHRTVI DSGDALALEH VPGSVVVLGG
GAIGCEFASV WRSFGAEVTI VEALGHLVPA EDEASSKLLE RAFRARGIAL RLGVPLAGAK
TTDRGVTVVL EDGSTVDAEL LLVAVGRGPV SAGLGLDEVG VSTDRGHVLV DTHLRTNIPT
VSALGDVRPG PQLAHVAFAE GILSAELLAG LDPVPVDYDN VPRVTYSHPE VASVGLTAAA
ARERHGEINT ATYHLAGNGK ARILRSAGAV TVVSAADGPV VGVHMVGDRV GELIAEAQLI
TNWEAYPADV AQLLHPHPTL SEALGEAHLA LAGKPLHVHS
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