Gene Franean1_1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1775 
Symbol 
ID5670177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2132201 
End bp2133034 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content75% 
IMG OID641240696 
Productlipoate-protein ligase B 
Protein accessionYP_001506119 
Protein GI158313611 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.284998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.177218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCCT GCTGCCCCGG CCCGCGGGCG TACGCTCGGG ACGTGGATGT CCTCCGGTTG 
GGTGTCGTTC CCTATCGCGA GGCCTGGGAG ATGCAGCGGG CCCTGGCCGA TGACCGCCGC
CACGGACGCG GCTCCGACAC GCTGATCCTG CTGGAACACC CCGACGTCTA CACGGCGGGC
CGGCGGACGG GCGCGGGTGA CCGCCCGGTC GACGGGACGG AGGTCGTCGA CGTCGACCGC
GGCGGCGGCA TCACCTGGCA CGGCCCGGGG CAGCTGGTCG GCTACCCGAT CGTGCGGCTC
CCGATGCCGC TGGACGTCGT GGCCTACGTA CGGGCACTGG AGGCCGGCCT GATGGCGGCC
TGCGCCGAGT TCGGTCTCGA GACCCGGCGG GTCGAGGGGC GCACGGGCGT GTGGACGTCC
GACGGCCTGC GCAAGCTCGC CGCCATCGGG GTCCGGGTGA GCTGGAAGGT CACCAACCAC
GGTTTCGCGC TGAACTGCGA TCCCGCGCTC TCCGCGTTCG GCCGGATCGT CCCGTGCGGG
ATCTCGGACG CCGGCGTGAC CAGCCTGAGC CGGGAGCTGG GCCGTCCGCT GCCGGTGGCC
GAGGCCCGCC CGGTGGTCGA ACGGCACATG CTCACCGCGC TCGCCGACTA CCTGGCCGCG
GGCCTGGCCG CCGAGGCCGG CCGCCGGCCG GCAGGCGCGG AGGACAGCGC GGGCAAGGTG
GCCGGCACGG CCACGGCGGG CACCGCGGCC ACGGCGGCCA CGGCAGCCAC GGCGGGAACG
TCCGACACGG ATCTGATCGG CGCGGGGCTC GCCGGCGGGA AGGTTCACCG ATGA
 
Protein sequence
MWPCCPGPRA YARDVDVLRL GVVPYREAWE MQRALADDRR HGRGSDTLIL LEHPDVYTAG 
RRTGAGDRPV DGTEVVDVDR GGGITWHGPG QLVGYPIVRL PMPLDVVAYV RALEAGLMAA
CAEFGLETRR VEGRTGVWTS DGLRKLAAIG VRVSWKVTNH GFALNCDPAL SAFGRIVPCG
ISDAGVTSLS RELGRPLPVA EARPVVERHM LTALADYLAA GLAAEAGRRP AGAEDSAGKV
AGTATAGTAA TAATAATAGT SDTDLIGAGL AGGKVHR