| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1768 |
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| Symbol | |
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| ID | 5670170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2123879 |
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| End bp | 2125657 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641240689 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001506112 |
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| Protein GI | 158313604 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.346269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0112079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCACG CGCCGCACAA TATCGACACG CTGACAGCCG CCTACTTTAC CCGCCCCACC
GACCTTCCGT TCTCCCCGCC TCCTGGAGAA ACCGCGCCGG AGCAGTGGGC GCCACGGGAT
CTGGGGCCGA ACGACGTCGA GGCATTCATC GATGGTCTAG CCTATTTCAC CGCCGTCGAG
AACGAGATCG ACCAGCTCAT CGCCGGTCCG GTCGGCGCGG GGTTCTTCTA CTGCACGGCG
TGGTGGCTCG GCCTGGTCTC GACGCCGGCG ACGGTGCGGA TCCGCTCGTT CGACAAGTCG
ATCGGAAAGA TCGCCGCGAC AGTGGGGATC GACCTCCAGG ACGAATTTAC CCGAAATCTG
GGCCAGGACG AGTTCAAACT ACCCAGCGGC ACCCCGCTGC GATCGAAGCT CGCCCAGCTC
ATCGGTCGGA AGGTGGATGT CCGGATCCTG GCCTGGACGT CGCCCTTCGC GCCGAAGTAC
AAGCCGGTGG CCGACCTGCT GGGAGGCCTG ACCGACCTCA ATCTCCACAC CATCCTCAGC
GTTGACTCGC TGCGGCGGAT CTACGGGCCC GCCGGCCAGA ACAAGATCCT GCTCAACACG
TGCGCGCATC CGCTGGGGGC CGCCCACGCC AAGATGATCG TGTGCGGCAG CGCGAATCGG
CTCGCCGCTT TCACCGGCGG GCTCGACGCG GCACCCGGCA GAATGATGCC GGTGCCCTGG
GCGCTGGCGA GTCCGACCCG TGGCTGGCAC GACGTGGCGG TCCGGGTCCA GGGCCCGGCG
GCCGGGGCGA TGCACAACTT CTTCCGCAGT CTGTGGAATG AGCAGCTCAA ACAGCCGATC
GACACGTTCG TCCTCGACGA CCAGCAGATT CCCACGCATT TCGCGGACTC GCCCCCGGTT
CCGGCCGCCC CGGCGCCGCC GGCCGTCGTC GGACCGCGCC AGCGGGTTCA GGTCCTGCGG
ACGGTGCCGC AGATGAAGTT CTCGGCGGCC GGCCCGGAAA GGCTTGGCCC GTCCGCCGCG
CAGCGATGGC TTCTCACCAC CGCGGCCGGG TTCAGGCGAG CGCCCATCAC CTTCGCCCCG
GATGGAATCT TCGAGTTTCA CGTAGCGCTG CGAAAGGCGA TTTCACAGGC CACCCGGTAC
ATTTTCATCG CCGACCAGGC ATTCTCCTCG CAGGAGGTGA TGGGCTGGCT CAACGCCAGA
CTCATCCAGC AGCCGGGCCT GAAAGTGATC CTGGTGCACG GCGCCGACCC CGCCGACCCG
CCGTCCGGGC TGCTGAACCA CGCCGTCAAC AACTTCCTGC TGCCCCACCT GCCGGGAGTC
GGTGGAAACC CGAACAATGT GATGGTCTGT GGCTGGGCTG GCGTCACGGT CCACAGCAAG
GTTGTCATCA TCGATGACCA GTGGTGTGCG GTCGGCTCGG CGAACTGTAT GCGCCGCAGC
CATTTCACGG ATATCGAGCT GTCGATCGCC GTGCTTGACG AGGACGAGCC TGGTTTCGCT
CAGCGGCTTC GCCGGGACCT CTGGGCGCGG TACTGCGGCG TGCCGCTGCC GGGGGAGTCG
ATCGTCTTCT CCTACGACGA CGAACTCACC GCCCTGCTCG ACCTCAACCG GGCGCTGGGG
ATCTGGAAGC CGGCGTGGGG GTCCGGGGCG GCGCTGCCGA TGGCCGCGCA CCTGCTCGGC
TCGGTCCAGC CGTACCCGCT GCCCATGCCC GCGCCCACGA TCGCCTACAG CGAGGCGGCG
TACGACGCGC AGGACATCGA CTCGCGCAAG GTTGTCTGA
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| Protein sequence | MSHAPHNIDT LTAAYFTRPT DLPFSPPPGE TAPEQWAPRD LGPNDVEAFI DGLAYFTAVE
NEIDQLIAGP VGAGFFYCTA WWLGLVSTPA TVRIRSFDKS IGKIAATVGI DLQDEFTRNL
GQDEFKLPSG TPLRSKLAQL IGRKVDVRIL AWTSPFAPKY KPVADLLGGL TDLNLHTILS
VDSLRRIYGP AGQNKILLNT CAHPLGAAHA KMIVCGSANR LAAFTGGLDA APGRMMPVPW
ALASPTRGWH DVAVRVQGPA AGAMHNFFRS LWNEQLKQPI DTFVLDDQQI PTHFADSPPV
PAAPAPPAVV GPRQRVQVLR TVPQMKFSAA GPERLGPSAA QRWLLTTAAG FRRAPITFAP
DGIFEFHVAL RKAISQATRY IFIADQAFSS QEVMGWLNAR LIQQPGLKVI LVHGADPADP
PSGLLNHAVN NFLLPHLPGV GGNPNNVMVC GWAGVTVHSK VVIIDDQWCA VGSANCMRRS
HFTDIELSIA VLDEDEPGFA QRLRRDLWAR YCGVPLPGES IVFSYDDELT ALLDLNRALG
IWKPAWGSGA ALPMAAHLLG SVQPYPLPMP APTIAYSEAA YDAQDIDSRK VV
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