Gene Franean1_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1740 
SymbolargD 
ID5670142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2079854 
End bp2081098 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content74% 
IMG OID641240658 
Productacetylornithine aminotransferase 
Protein accessionYP_001506084 
Protein GI158313576 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00212917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACGCCG ATCTGCTCGA CCGGCGCGAC GCCGTCATCA TGGCCACCTA CGGCCGTCCC 
TCCATCGCCC TGACCCGCGG GTCCGGCGCG CACGTGTGGG ACGCCGACGG CCGCGAGTAC
GTGGACCTGA TCGCCGGGGT GGCGGTGAGC GTCCTCGGCC ACTGCCACCC GGCGGTGCGC
GCGGCGGTAG TCGCACAGCT CGACACCCTG GGCCACACGT CCAACCTGTA CGTGAACACC
CCGCAGCTCC TGCTCGCCGA ACGCCTGATC GAGCTGCTGG GCGTGGACGG CCGGGCCTTC
TTCTGCAACT CGGGCGCCGA GGCGAACGAG ACCGCGATCA AGATCAGCCG ACGGACCGGC
CGTTCGGAGA TCATCGCGGC CGAGGGGGCC TTCCACGGCC GGACCATGGG CGCCCTGTCG
ATCACCGGCC AGCCCGGGAA GCGGGCGCCG TTCGAGCCGC TGCTGCCGGG CGTGCGCTTC
GTCCCGCACG GCGACGCCGA CGCGCTGGCC GCCGCGGTCA GCGAGCGGAC TGCCGCCGTC
TTCCTGGAGC CGACCCTGGG CGAGGCCGGG GTGATCCCAT CGCCGCCCGG CTACCTGGTC
GCCGCCCGCG CCGCCTGCGA CGCACACGGC GCGCTGCTCG TGTTCGACGA GGTCCAGAGC
GGCATCGGCC GCACCGGCGC GTGGTTCGCC CACCAGACCG AGGGCGTCGT ACCGGACGTG
ATCACCCTGG CCAAGGGCCT CGGCGGCGGC CTGCCCATCG GGGTCTGCAT CGGGATCGGC
GCTGCCGGTC ACCTGCTGCG TCCCGGTGAC CACGGCAGCA CCTTCGGTGG CGGGCCGGTG
GTGTGCTCGG CCGCCCTCGC CGTGCTCGAC ACGATCGTGG CCGAGGGCCT GCTCGAGCAC
GCGGTGGTGC TCGGCGGCGC ACTGCGCGAC GGCATCGTCG CCGCGGACGC GGCCGGGGTC
ACCGGGGTGC GCGGCGTCGG GCTGTGGCTC GCGATCGAGC TCGACGCCCC GTTCGCGCCC
GAGGTGGAGA CCGCCGCCCG CGAGGCCGGT TTCCTGGTGA ACGCGGTCGC GGCGAACGCC
GTCCGCCTCG CGCCGCCGCT CGTGCTCACC CCGGCGGACG TCGACGCGTT CGTCGCCGCG
CTGCCCGGCA TCGCCGACCG GGCGCGGGAG ACCCACGCCC AGGGGGACAG GACCGCGGCG
ACCGGCCCGA AAAAGTCGGA CGAAGGATCT AAGGTCAGCG CATGA
 
Protein sequence
MNADLLDRRD AVIMATYGRP SIALTRGSGA HVWDADGREY VDLIAGVAVS VLGHCHPAVR 
AAVVAQLDTL GHTSNLYVNT PQLLLAERLI ELLGVDGRAF FCNSGAEANE TAIKISRRTG
RSEIIAAEGA FHGRTMGALS ITGQPGKRAP FEPLLPGVRF VPHGDADALA AAVSERTAAV
FLEPTLGEAG VIPSPPGYLV AARAACDAHG ALLVFDEVQS GIGRTGAWFA HQTEGVVPDV
ITLAKGLGGG LPIGVCIGIG AAGHLLRPGD HGSTFGGGPV VCSAALAVLD TIVAEGLLEH
AVVLGGALRD GIVAADAAGV TGVRGVGLWL AIELDAPFAP EVETAAREAG FLVNAVAANA
VRLAPPLVLT PADVDAFVAA LPGIADRARE THAQGDRTAA TGPKKSDEGS KVSA