| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1732 |
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| Symbol | |
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| ID | 5670134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2068414 |
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| End bp | 2069640 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240650 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001506076 |
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| Protein GI | 158313568 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0544412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000497213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGACGCGCA TCGTCGCGTC CACTTCCGGG CATTACGTCG CGGACGACGA CCAGGTCGTC
GGTGTACCGG ATGTCGGTGT CACGGAGGGT GACGCCGTAG CCGCCGGTGT CCCCGACGTC
GGCGCCACGG CGCACGGGGC TGGTGAGACC GAGACCGAGA CCGCGGAGGA GTCGGTGGAC
GTGCTTTCTC CGGCGGCCCT CGACCTGCTG CCCGACCCGG TGGTCGTCAC CGACGCGACG
GGCACTGTGG AGCTCTTCAA CGCCGCCGCG ACGAAGATGA CCGGGCTGTC CGCCGGGTAC
GCGGTCGGTC GGCACGTCAC CGACGTCCTG CCGCTGCTCG ACGAGCGGGG CAACGACTGG
TGGGAGTGCT CGCAGCCGAG CCGCGGGCTG CCCCGGGTCA CCGGGCAGCC CGAGCGCCGG
CTGACCTACG CCGGTCCCGC CTCCGACCAT GACTTCAACG TCACCACCCG GTTCACCCGT
GTCGAAGGCG CCCTCGTACG GGTCGCCGTC TGCCTGCGTG ACACGGTCAG CCGGGAGCGG
ATCGAGCGCA ACCGCGCCGA TCTCATCGCC ACGGTCGCGC ACGAGCTGCG CTCGCCGCTG
ACCAGCGTGA AGGGGTTCAC GGCGACCCTG CTCGCCCGGT GGGACAGATT CACCGACGAG
CAGAAGAAGC TCATGCTCAA CACCGTCAAC ACCGACGCCG ACCGGGTCAC CAGGCTGCTG
ACCGAGCTGC TCGACGTCTC CCGCATCGAC GCCGGCCGGG TGCAGATCCG CAAGCAGATC
GTGGACATGC GCGTCGCCGT CCGCCGGGTC GTCGAGGGCA AGATCGCGGC CGGCTCCGCC
CCGCCGGAGC GGTTCGCCGT CCGGATGGAG GGCGACCTGC CCGAGATGTG GGTCGACCCC
GACAAGATCG AGCAGGTGCT CCACAACCTT GTCGACAACG CGTTGCGCCA CGGCGCGGGT
ACTGTGACCG TCGTGCTCAG CGGTACGGGG ACAGGCGCCG AGGTGACGGT CGGCGACGAG
GGCGACGGCG TCCCGGAGGC CAACGCCACC CGGGTGTTCG CCAAGTTCTG GCGCGGCGCG
AGCCGCGGGA ACGGCACCGG TCTCGGGCTG TACATCGCCA AGGCGCTGAT CGACGCGCAC
GGTGGGACGA TCTCGGTCGG CAAGGCGCCG GGCGGCGGGG CGGAGTTCCG ATTTTTCGTG
CCCGCCGGTG GGCCCGTGTT CGGCTGA
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| Protein sequence | MTRIVASTSG HYVADDDQVV GVPDVGVTEG DAVAAGVPDV GATAHGAGET ETETAEESVD
VLSPAALDLL PDPVVVTDAT GTVELFNAAA TKMTGLSAGY AVGRHVTDVL PLLDERGNDW
WECSQPSRGL PRVTGQPERR LTYAGPASDH DFNVTTRFTR VEGALVRVAV CLRDTVSRER
IERNRADLIA TVAHELRSPL TSVKGFTATL LARWDRFTDE QKKLMLNTVN TDADRVTRLL
TELLDVSRID AGRVQIRKQI VDMRVAVRRV VEGKIAAGSA PPERFAVRME GDLPEMWVDP
DKIEQVLHNL VDNALRHGAG TVTVVLSGTG TGAEVTVGDE GDGVPEANAT RVFAKFWRGA
SRGNGTGLGL YIAKALIDAH GGTISVGKAP GGGAEFRFFV PAGGPVFG
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