Gene Franean1_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1727 
Symbol 
ID5670129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2064427 
End bp2065602 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content79% 
IMG OID641240645 
Producthypothetical protein 
Protein accessionYP_001506071 
Protein GI158313563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00463945 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00188922 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCCCCG ACCTGCTGAC GCCACCCGGG CAGGGTGACC ACGGCCGCGC CGACTCCGCG 
TTGCTGGCGG CCCTGCGCTC AGGCGACCGT GCCGCGCTCA CCGCGGCGCT TCCTGGCGCC
CGGGTGTTCG TCGGGGTCGA GGCCCGGGCT CTCGCCACCG ACGCGCTGAC CGGCGCGGAC
AAGAAGAGCG ACATGGTCCT GGTCACCCTG CGTACGCCGT CCGGCTCCGG TGCGCTGCCG
GTGTTCAGCG CGGTGGACGT GATGGCGGCC TGGCGCCCCT CGGTGCGCCC CGTTCCCGTG
ACGCTGCCCG ACGCGTGCGC GGAGGCCGTC CGGATGGGCC TGGCCGCCGT CGTGATCGAC
CTCGGCGGCC CGGCCCCGGT CACCCTGGAT GTCCGGCCCG CCGCCGGGGA TGTCGGCGGC
GGGGTCGGCC GGCGTGGCCC GCGGCCCTTC GGCGGCGGCG AGGGCATGTG GATCTCGTCG
GGCGAGCCGG GGACGTCCGC CGCCATGCGG GGCGCGGCGG GCCCAGCGGC CGCTGGCGCC
GACGGCCACG CGGACGAGCT GATCGTCGCG GCAGACTCCG GGGGTGGTCT GCTCCGCCCG
CGCCCGGTGC CGCTCGGCGC GCGGGGCCGT CGGCGGATCC GCGCCGCGCT CGCCGGCCTG
CCGCCGGAGA CGGAGGTCTG GCCGGCGGAG CTGGCGGAGT CGATCGGGCA GCGCTGGCCG
GCCCGCCCGG TCCTCGCCGT CGCGGTGAAC GGCGCCGCCG GTACCGCCGC TGCCGCCGGT
GCCGCCGCGG CTGGTGCCGG TGCCACCGCG GGTGCCGCGG GCGCCGCGGG CAGGGCCGGG
AGCCGGGACG CCGTCGACCG CGGGCACCTC GAGAATCCAG GCGACACGGA GAATCCAGAC
GGCACCGGCG ATTTCGGGGG TGCGGGGGAT TTCGGGGACA CCGGGGCGGC CGGGGGCGCG
GCTCCCGGGG GTGACGACAT GATCACCGAG ATCGTGCGCC GGCTCCGCCT GCTGATCGAG
GACGGGCCCG GCGGATCCGC GGCGGGCGGC GGGAGCGCGG AGGCCGCCGT GCTCGTCGTC
GACCCCACCG AGGTGCCAGC GGTGCGCGCC CATCTCGGCC GCGGGGTGCG CCCCCCGCGG
CGTTCGCTGT TCCGCCGTCG GGACGGCCGC GCCTGA
 
Protein sequence
MSPDLLTPPG QGDHGRADSA LLAALRSGDR AALTAALPGA RVFVGVEARA LATDALTGAD 
KKSDMVLVTL RTPSGSGALP VFSAVDVMAA WRPSVRPVPV TLPDACAEAV RMGLAAVVID
LGGPAPVTLD VRPAAGDVGG GVGRRGPRPF GGGEGMWISS GEPGTSAAMR GAAGPAAAGA
DGHADELIVA ADSGGGLLRP RPVPLGARGR RRIRAALAGL PPETEVWPAE LAESIGQRWP
ARPVLAVAVN GAAGTAAAAG AAAAGAGATA GAAGAAGRAG SRDAVDRGHL ENPGDTENPD
GTGDFGGAGD FGDTGAAGGA APGGDDMITE IVRRLRLLIE DGPGGSAAGG GSAEAAVLVV
DPTEVPAVRA HLGRGVRPPR RSLFRRRDGR A