| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1711 |
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| Symbol | |
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| ID | 5670113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2046345 |
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| End bp | 2047184 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240629 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001506055 |
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| Protein GI | 158313547 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.599081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00252542 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCTCAT CGGGCGCCCC CCGCCGGTGG ACGCCACCGG CGGGCCGCGC CCCGATCGCG
GTCGCGCTCG ACGCTCCGGA CGCCGCCACC GCGCTGGGCT GGGCCCGCGA GGTGGCGCCG
CACGTCGCCG TGCTGAAGAT CGGTCTGGAG CTCTTCTACC GGGCCGGGCC GACGATCGTG
ACTGCGCTGC GTGACGAAGG GCTGCTCGCT CCGGCTCGGC CGGCGGAGCC TGCGGCGCCT
GCTCGGGTGG TGAGTTCCGT CACGGGGGGT GATGTGACGG ACGGCTGGGG TGAGTCGCAC
GGCTCCGCGG CGCCCGAGCT CTTCCTCGAC CTGAAGCTCC ACGACATACC GGCGACCGTG
GCCGGCGGGA TGCGCTCGCT GGCCACGCTG GCACCTCGCT TCGTGACCGT GCATGCGGCC
GGCGGCGCGG CCATGGTGCG CGCCGCGGTC GACGCCGGGC CCGATGTTCA TGTAACCGCG
GTCACGGTGC TGACGTCGCT GGACGCCGCC ACGCTCGCCG CCGTCGGGCT GTCCGGACCG
CCCTCGGACG CCGTCCGCAG GCTCGCGGTG CTCGCTGTGG AGGCCGGTGC GCGGGCGCTC
GTCTGCAGCC CGAAAGAGGT CTCCATGGTC CGCGCGGAGC TTGGTGAAAC TGTGACTCTG
GTCACGCCTG GAGTGCGTCC AGAGGGGTCT GAGCGGGCTG ACCAGGCCCG GGTCGCCACC
CCGGAACGGG CACTCGCTGA CGGTTCGGAC CTCCTCGTGA TCGGCCGTCC GATCACCTCC
GCGGCCGATC GGGCCGTGGC CGCCGCCACT ATCGCCACCA GGGTTACTCC ACTCCGGTAG
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| Protein sequence | MTSSGAPRRW TPPAGRAPIA VALDAPDAAT ALGWAREVAP HVAVLKIGLE LFYRAGPTIV
TALRDEGLLA PARPAEPAAP ARVVSSVTGG DVTDGWGESH GSAAPELFLD LKLHDIPATV
AGGMRSLATL APRFVTVHAA GGAAMVRAAV DAGPDVHVTA VTVLTSLDAA TLAAVGLSGP
PSDAVRRLAV LAVEAGARAL VCSPKEVSMV RAELGETVTL VTPGVRPEGS ERADQARVAT
PERALADGSD LLVIGRPITS AADRAVAAAT IATRVTPLR
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