| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1698 |
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| Symbol | |
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| ID | 5670100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2030861 |
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| End bp | 2031523 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240616 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001506042 |
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| Protein GI | 158313534 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.194935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.176249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGTCG CCGCCACCGT GGCGGCCGCG GTCTGCGCCG CGCTGCCGAT CCCGCTGCTG
CCCCGGGTCG TCGACTCCTT CGATCCAGTG GACGGCCGTT TGCCGCGCCG GGCGACCCCC
GCGCCGGCCG TGCTCGGCGC CGTCACCGCC GTCCTGATCG CCGCCGTCGC CGCGTCGACC
TACCCGCACC CGGGACGTCT GCCCGCGTAC CTGTACCTGA CGGTCGTCGG GGTCGTGCTT
GCCGCCGTGG ACCTGCGGGT GCACCGCCTG CCGGACGTGA TCGTGCTGCC CTCGTACGCC
GTGCTGGCCG CGCTGCTCGC CGTGCCCGCG TTGGCCGAGG GCGCGCCCAA CCGCTGGCCG
CGGGCGCTGC TCGCCGGCGC CGTGGCCTGG CTGTTGTACG CGGGCCTGCG CCTGCTGCCG
GGGGCCGGGC TGGGGCGGGG GGACGTGAAG CTCGCCGGGC TGCTCGGCGT GGCGACGGGC
TGGCTGGGCT GGTCGGCCGT CGTGGTGTGG CTGGTCGCGA CGACCATGAT CTCCGGTGCG
GTGGTCCTCG TGCTGCTGGC GCTGCGCCGT GTGTCCCGCC GTGATCCGAT CGCCTACGGC
CCGTTTCTGC TGTTCGGGGC GCTGATCGCG GTGCTCGGCG TGGGCTGGGA GCCGGCCGGC
TGA
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| Protein sequence | MVVAATVAAA VCAALPIPLL PRVVDSFDPV DGRLPRRATP APAVLGAVTA VLIAAVAAST
YPHPGRLPAY LYLTVVGVVL AAVDLRVHRL PDVIVLPSYA VLAALLAVPA LAEGAPNRWP
RALLAGAVAW LLYAGLRLLP GAGLGRGDVK LAGLLGVATG WLGWSAVVVW LVATTMISGA
VVLVLLALRR VSRRDPIAYG PFLLFGALIA VLGVGWEPAG
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