| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1690 |
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| Symbol | |
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| ID | 5670092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2021307 |
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| End bp | 2022332 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240608 |
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| Product | putative integral membrane sensor protein |
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| Protein accession | YP_001506034 |
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| Protein GI | 158313526 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.265588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGATGG CCCATCAACA TTCGAGTCAG GATCTTCTGT TCGTCGCGGT GTCCGTACTG
CTCGCCGTGA TCGGCTCCTT CGCGGCGCTG GTGAGCGCGA TGCGGATACC TTCCGCCGAG
GGGCGGGCGA GGTTGCAGTG GACGATGTTG GCCGCGGTGT CTCTCGGTGG CGGCGCGGTG
TGGTCCATGC ACTTCATCGG AATGATCGGT TACCAGGTCG ACGACCGCGA CGTGCGGTAC
GACCTGCCGC TCACCGGGCT GTCCCTGCTC ATCGCGATCG CCGTCTCGGC GGTGGGCCTG
TCGCTGGTGG CCCGGCGTCC GGACAGCCCG GTGCGGCTGG CCGCCGGTGG TGTCGTCGCC
GGGCTCGGCG TCGCCGCGAT GCATTACACG GGCATGGCCG CGATGCACGC CGGAAGTGAC
ATCAGCTACC GGCACGGGCT GGTGGCCCTG TCGGTCGGCG TCGCCGTCGT CGCCGCGCTG
GCCGCGCTGT GGATCGCCTT CCGTGTGCTC ACCGGGCTGC ACGTCGTGCT GGCCTCGCTG
GTCATGGCCG TGGCCGTCTG CGGGATGCAC TACACGGCGA TGGCCGCGAC GCAGGTCCAG
ACGGCCGCCG TGCTGTCCCC GGTCACCGGG GCGGACCCGA TCACCCTGGC GATGCTGGTG
TGCGTGATCG CCTTCTCCGT GCTCGCGGTC GTGATCTTCG CCGCGCTCGG CGGGGTCACC
TATTCCGATC CGTTCGCCCC GGTCCAGGAG CGCAGCCGGC ATCGCGGCGG GCCCCGGCCG
GGCGCCGGGC GGGTCGAGGG CGGCCCGTCC CACCGGGAGC GCCCCGGTGG CGAGGGCCGG
GGCGGTGGGG GTGAGCGGCC GGAGCAGGCC GATCGGGTCG GCGGAGGCGA GCGGCCCGGG
ACCGACGAGC GGGCCGCCTG GGCGGCGCAG CGGAGCGGTC CCCTCGAAGC GGTCACGTCG
AACGCGCCGC GGGACCGGGG GCACCGGCCC GGCCCGGCCG GACCGGCGAA CCGGCGGACG
CCCTGA
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| Protein sequence | MQMAHQHSSQ DLLFVAVSVL LAVIGSFAAL VSAMRIPSAE GRARLQWTML AAVSLGGGAV
WSMHFIGMIG YQVDDRDVRY DLPLTGLSLL IAIAVSAVGL SLVARRPDSP VRLAAGGVVA
GLGVAAMHYT GMAAMHAGSD ISYRHGLVAL SVGVAVVAAL AALWIAFRVL TGLHVVLASL
VMAVAVCGMH YTAMAATQVQ TAAVLSPVTG ADPITLAMLV CVIAFSVLAV VIFAALGGVT
YSDPFAPVQE RSRHRGGPRP GAGRVEGGPS HRERPGGEGR GGGGERPEQA DRVGGGERPG
TDERAAWAAQ RSGPLEAVTS NAPRDRGHRP GPAGPANRRT P
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