| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1676 |
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| Symbol | |
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| ID | 5670078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2004649 |
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| End bp | 2005476 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240594 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_001506020 |
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| Protein GI | 158313512 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.344673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCC AGGTTCCGCG GGCGGCCCAG CGCAGCGCGC GGGCGTCCGA GATCGTCGCG
GAGTCCATTC GCGTCCAGGT CGCCAGGGGG GAACTTCGGC CGGGTGATCG TTTCCCGACC
GAAGACGAGC TCATGGAGAT CTTCGGCATC GCCCGCACGA CGCTGCGCGA GGCGCTGCGC
ATCCTGGAGG CCGAGGGCCT GGTCACCGTC CTGCGCGGGC GGCACGGCGG GCCGCGGGTC
ACCAGTCCGA CCGTCGACCA CGTCGCCAAG GTCTTCGCCC TGCTCCTGCA ACTCGAGGGC
GTGACGATGA GCGACATCCA CCAGGCGCGG GAGCTCGTCG AGCCGACCCT GGCCCACACC
CTCGCCCAGA CCAGAACCCC GCAGATGCTC ACCGAGCTGC GCGCGGCCGT CGAGGCCGCC
GAGGCGGCGG CCGACGCCGA CGACGGCCCC GCCTTCCTCG ACACCGCCGC GGCCCTGCAC
GCGACGATCG CCGAGCACGG AGGCAACCGG TCGCTGGGCA TCTTCGCGCA ACTGCTCCAC
GAGGTGGCCG TCCGCTGCCA CGAGGCGTCC GGGCGGGTGG CCACCGCCGA GGACCGCAGG
CGCGCCGTCC GCTACTACCG CCGGTTCTAC AAGCTCGTCG AGGCCGGCGA CGCGGCGGGC
GCCCGGGAGC ACTGGCGGTC CCGGGTGGCC CACGCGAACG AGGCGGGCCC GACGACCGGC
AAGGAGGGGG ACGAGCCGGT GGACGTGTTC GCCCGCCCGA CCGAGCTCTC CCGGCCGGGC
GAGCTCTCCC GGCCGGGCGA ACGGACGGCT GCCGTGCGCC GCCGCTGA
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| Protein sequence | MAVQVPRAAQ RSARASEIVA ESIRVQVARG ELRPGDRFPT EDELMEIFGI ARTTLREALR
ILEAEGLVTV LRGRHGGPRV TSPTVDHVAK VFALLLQLEG VTMSDIHQAR ELVEPTLAHT
LAQTRTPQML TELRAAVEAA EAAADADDGP AFLDTAAALH ATIAEHGGNR SLGIFAQLLH
EVAVRCHEAS GRVATAEDRR RAVRYYRRFY KLVEAGDAAG AREHWRSRVA HANEAGPTTG
KEGDEPVDVF ARPTELSRPG ELSRPGERTA AVRRR
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