Gene Franean1_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1672 
Symbol 
ID5670074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1999981 
End bp2000757 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID641240590 
Productmethyltransferase type 12 
Protein accessionYP_001506016 
Protein GI158313508 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.388652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCCGG CGACTTTAGA CGACGAGGTT CGTCGGGCTT TCGACCTGCT CCGAGTGCTG 
CGCCGTTCGC CTGTCCTGAC CTACACTGGT CCAATGAGTG AGACTGCAAT CTCATATGGT
GAGATGATCT GGGATCCGGA GACCTACGAC GCGCAACGTC GCCGGCTGGT TCCGTTCTTC
GATCTGCTCT ACGGCGCGGT CGGGGGTCTG GTGGCTGAAC TGGGTGGGGC GCAACCGGTG
GTGCTGGATC TGGGTGCGGG AACCGGCCTG TTGTCTGCGG CGGTGATCGG GGTCGTGCCC
GGTGCCAGGC TGCATCTGAT GGACGGGTCG GGCCCGATGA TCGACCGCGC GGTGTCTCGG
CTCCGGGCTC ATGTGGTGGG TGTGACGGTC GCCGACCTCA CCGACCCGCT GCCGGTGGGT
CCCTTCGCCG CGGTCGTCTC GGCGTTGGCG ATCCACCATC TGGACGACGA GGCCAAGCGG
AACCTGTTCC GGCGCGTCCG TTCGGTACTT GTTCCCGGTG GTCTGTTCGT GAATCTGGAA
CAGATCGTTG GGCCTGATGA GGAGACCACC GAGAGGTACG AGCGGATGCA CGAGCGATGG
GCCCGTGACG CGGGTTCGGA CGACGAGGAA TGGGCGGGGG CGCTCGCGCG CATGGCCCAC
GATCGGTGCG CTCCGCTCGA CGACCAACTC GGGTGGCTGC GGCAGGCGGG CTTCGGTTCC
GTCGACTGCG CGGTCAAGGC CTGGCGGTTT GCCGTGTACT CGGGGCGGGC TAGGTAG
 
Protein sequence
MGPATLDDEV RRAFDLLRVL RRSPVLTYTG PMSETAISYG EMIWDPETYD AQRRRLVPFF 
DLLYGAVGGL VAELGGAQPV VLDLGAGTGL LSAAVIGVVP GARLHLMDGS GPMIDRAVSR
LRAHVVGVTV ADLTDPLPVG PFAAVVSALA IHHLDDEAKR NLFRRVRSVL VPGGLFVNLE
QIVGPDEETT ERYERMHERW ARDAGSDDEE WAGALARMAH DRCAPLDDQL GWLRQAGFGS
VDCAVKAWRF AVYSGRAR